Cluster: CGMR018611_CGC80
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR018611
- CGC Family ID: CGCFAM_03467
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_14324 | k141_14324_17 | 20147 | 22126 | - | GH127 |
| pfam | k141_14324 | k141_14324_18 | 22254 | 22934 | - | Asp_Glu_race |
| TC | k141_14324 | k141_14324_19 | 23271 | 25028 | + | 8.A.59.2.1 |
| TF | k141_14324 | k141_14324_20 | 25006 | 26079 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_14324 | k141_14324_21 | 26076 | 27440 | - | GH29 |
| TC | k141_14324 | k141_14324_22 | 27462 | 29252 | - | 8.A.59.2.1 |
| TF | k141_14324 | k141_14324_23 | 29264 | 30343 | - | HTH_AraC |
| TC | k141_14324 | k141_14324_24 | 30722 | 31681 | + | 3.A.1.1.10 |
| TC | k141_14324 | k141_14324_25 | 31696 | 32634 | + | 3.A.1.1.29 |
| STP | k141_14324 | k141_14324_26 | 32673 | 34271 | + | SBP_bac_1 |
| sulfatase | k141_14324 | k141_14324_27 | 34273 | 35748 | + | S1_26 |
| CAZyme | k141_14324 | k141_14324_28 | 35829 | 41219 | + | GH111 |
| TC | k141_14324 | k141_14324_29 | 41432 | 42838 | + | 3.A.1.1.21 |
| TC | k141_14324 | k141_14324_30 | 43068 | 43946 | + | 3.A.1.1.7 |
| TC | k141_14324 | k141_14324_31 | 43954 | 44805 | + | 3.A.1.1.18 |
Gene ID: k141_14324_17
Type: CAZyme
Location: 20147 - 22126 (-)
Type: CAZyme
Location: 20147 - 22126 (-)
Gene ID: k141_14324_18
Type: pfam
Location: 22254 - 22934 (-)
Type: pfam
Location: 22254 - 22934 (-)
Gene ID: k141_14324_19
Type: TC
Location: 23271 - 25028 (+)
Type: TC
Location: 23271 - 25028 (+)
Gene ID: k141_14324_20
Type: TF
Location: 25006 - 26079 (+)
Type: TF
Location: 25006 - 26079 (+)
Gene ID: k141_14324_21
Type: CAZyme
Location: 26076 - 27440 (-)
Type: CAZyme
Location: 26076 - 27440 (-)
Gene ID: k141_14324_22
Type: TC
Location: 27462 - 29252 (-)
Type: TC
Location: 27462 - 29252 (-)
Gene ID: k141_14324_23
Type: TF
Location: 29264 - 30343 (-)
Type: TF
Location: 29264 - 30343 (-)
Gene ID: k141_14324_24
Type: TC
Location: 30722 - 31681 (+)
Type: TC
Location: 30722 - 31681 (+)
Gene ID: k141_14324_25
Type: TC
Location: 31696 - 32634 (+)
Type: TC
Location: 31696 - 32634 (+)
Gene ID: k141_14324_26
Type: STP
Location: 32673 - 34271 (+)
Type: STP
Location: 32673 - 34271 (+)
Gene ID: k141_14324_27
Type: sulfatase
Location: 34273 - 35748 (+)
Type: sulfatase
Location: 34273 - 35748 (+)
Gene ID: k141_14324_28
Type: CAZyme
Location: 35829 - 41219 (+)
Type: CAZyme
Location: 35829 - 41219 (+)
Gene ID: k141_14324_29
Type: TC
Location: 41432 - 42838 (+)
Type: TC
Location: 41432 - 42838 (+)
Gene ID: k141_14324_30
Type: TC
Location: 43068 - 43946 (+)
Type: TC
Location: 43068 - 43946 (+)
Gene ID: k141_14324_31
Type: TC
Location: 43954 - 44805 (+)
Type: TC
Location: 43954 - 44805 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.