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Cluster: CGMR018611_CGC69

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_80118 k141_80118_2 1349 2239 + 3.A.1.1.42
TC k141_80118 k141_80118_3 2239 3105 + 3.A.1.1.34
CAZyme k141_80118 k141_80118_4 3175 5280 + GH36
TF k141_80118 k141_80118_5 5470 6531 - HTH_AraC
CAZyme k141_80118 k141_80118_6 6796 10878 + GH106
pfam k141_80118 k141_80118_7 11058 11543 + Amidase_6
peptidase k141_80118 k141_80118_8 11724 12644 + M15.UPB
TC k141_80118 k141_80118_9 12631 15081 - 3.A.1.32.3
TF k141_80118 k141_80118_10 15370 16092 + MerR | MerR
pfam k141_80118 k141_80118_11 16155 16439 - Mor
TC k141_80118 k141_80118_12 16680 18128 + 3.A.18.1.1
Gene ID: k141_80118_2
Type: TC
Location: 1349 - 2239 (+)
Gene ID: k141_80118_3
Type: TC
Location: 2239 - 3105 (+)
Gene ID: k141_80118_4
Type: CAZyme
Location: 3175 - 5280 (+)
Gene ID: k141_80118_5
Type: TF
Location: 5470 - 6531 (-)
Gene ID: k141_80118_6
Type: CAZyme
Location: 6796 - 10878 (+)
Gene ID: k141_80118_7
Type: pfam
Location: 11058 - 11543 (+)
Gene ID: k141_80118_8
Type: peptidase
Location: 11724 - 12644 (+)
Gene ID: k141_80118_9
Type: TC
Location: 12631 - 15081 (-)
Gene ID: k141_80118_10
Type: TF
Location: 15370 - 16092 (+)
Gene ID: k141_80118_11
Type: pfam
Location: 16155 - 16439 (-)
Gene ID: k141_80118_12
Type: TC
Location: 16680 - 18128 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Robinsoniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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