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Cluster: CGMR018611_CGC65

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_36317 k141_36317_2 548 2389 + 8.A.59.2.1
TF k141_36317 k141_36317_3 2370 3881 + HTH_AraC
TC k141_36317 k141_36317_4 3922 5088 + 3.A.1.1.2
STP k141_36317 k141_36317_5 5201 6562 + SBP_bac_1
TC k141_36317 k141_36317_6 6619 7524 + 3.A.1.1.19
TC k141_36317 k141_36317_7 7526 8359 + 3.A.1.1.41
CAZyme k141_36317 k141_36317_8 8540 10465 + GH127
pfam k141_36317 k141_36317_9 10570 11016 - Cupin_2
NULL(UNKNOWN) k141_36317 k141_36317_10 11247 11678 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_36317 k141_36317_11 11760 13961 + 2.A.6.4.2
pfam k141_36317 k141_36317_12 14217 15482 + AAA_21 | AAA_21
pfam k141_36317 k141_36317_13 15485 16135 + RloB
TC k141_36317 k141_36317_14 16381 17679 + 3.A.1.1.47
TC k141_36317 k141_36317_15 17704 18585 + 3.A.1.1.28
TC k141_36317 k141_36317_16 18608 19426 + 3.A.1.1.28
TC k141_36317 k141_36317_17 19517 21343 + 9.B.33.1.1
TF k141_36317 k141_36317_18 21439 22983 + HTH_AraC | HTH_AraC
CAZyme k141_36317 k141_36317_19 23401 30636 + GH136 | GH20
Gene ID: k141_36317_2
Type: TC
Location: 548 - 2389 (+)
Gene ID: k141_36317_3
Type: TF
Location: 2370 - 3881 (+)
Gene ID: k141_36317_4
Type: TC
Location: 3922 - 5088 (+)
Gene ID: k141_36317_5
Type: STP
Location: 5201 - 6562 (+)
Gene ID: k141_36317_6
Type: TC
Location: 6619 - 7524 (+)
Gene ID: k141_36317_7
Type: TC
Location: 7526 - 8359 (+)
Gene ID: k141_36317_8
Type: CAZyme
Location: 8540 - 10465 (+)
Gene ID: k141_36317_9
Type: pfam
Location: 10570 - 11016 (-)
Gene ID: k141_36317_10
Type:
Location: 11247 - 11678 (+)
Gene ID: k141_36317_11
Type: TC
Location: 11760 - 13961 (+)
Gene ID: k141_36317_12
Type: pfam
Location: 14217 - 15482 (+)
Gene ID: k141_36317_13
Type: pfam
Location: 15485 - 16135 (+)
Gene ID: k141_36317_14
Type: TC
Location: 16381 - 17679 (+)
Gene ID: k141_36317_15
Type: TC
Location: 17704 - 18585 (+)
Gene ID: k141_36317_16
Type: TC
Location: 18608 - 19426 (+)
Gene ID: k141_36317_17
Type: TC
Location: 19517 - 21343 (+)
Gene ID: k141_36317_18
Type: TF
Location: 21439 - 22983 (+)
Gene ID: k141_36317_19
Type: CAZyme
Location: 23401 - 30636 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Robinsoniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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