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Cluster: CGMR018611_CGC56

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_80005 k141_80005_8 6145 7665 + 8.A.59.2.1
TF k141_80005 k141_80005_9 7658 9256 + HTH_AraC | HTH_AraC
TC k141_80005 k141_80005_10 9253 10308 + 3.A.1.2.26
TC k141_80005 k141_80005_11 10463 11662 + 3.A.1.2.5
TC k141_80005 k141_80005_12 11741 13279 + 3.A.1.2.5
TC k141_80005 k141_80005_13 13282 14439 + 3.A.1.2.5
STP k141_80005 k141_80005_14 14580 15260 - cNMP_binding
pfam k141_80005 k141_80005_15 15326 16393 + IU_nuc_hydro
TC k141_80005 k141_80005_16 16377 17738 + 2.A.1.3.6
pfam k141_80005 k141_80005_17 17833 18411 + DUF1349
TF k141_80005 k141_80005_18 18424 19320 - HTH_AraC
CAZyme k141_80005 k141_80005_19 19652 20938 + CBM6 | GH43_2
TC k141_80005 k141_80005_20 21007 22743 + 3.A.1.1.9
TC k141_80005 k141_80005_21 22790 23692 + 3.A.1.1.9
TC k141_80005 k141_80005_22 23705 24598 + 3.A.1.1.9
CAZyme k141_80005 k141_80005_23 24618 27161 + GH3
CAZyme k141_80005 k141_80005_24 27137 28723 + GH78
CAZyme k141_80005 k141_80005_25 28736 30997 + GH3
Gene ID: k141_80005_8
Type: TC
Location: 6145 - 7665 (+)
Gene ID: k141_80005_9
Type: TF
Location: 7658 - 9256 (+)
Gene ID: k141_80005_10
Type: TC
Location: 9253 - 10308 (+)
Gene ID: k141_80005_11
Type: TC
Location: 10463 - 11662 (+)
Gene ID: k141_80005_12
Type: TC
Location: 11741 - 13279 (+)
Gene ID: k141_80005_13
Type: TC
Location: 13282 - 14439 (+)
Gene ID: k141_80005_14
Type: STP
Location: 14580 - 15260 (-)
Gene ID: k141_80005_15
Type: pfam
Location: 15326 - 16393 (+)
Gene ID: k141_80005_16
Type: TC
Location: 16377 - 17738 (+)
Gene ID: k141_80005_17
Type: pfam
Location: 17833 - 18411 (+)
Gene ID: k141_80005_18
Type: TF
Location: 18424 - 19320 (-)
Gene ID: k141_80005_19
Type: CAZyme
Location: 19652 - 20938 (+)
Gene ID: k141_80005_20
Type: TC
Location: 21007 - 22743 (+)
Gene ID: k141_80005_21
Type: TC
Location: 22790 - 23692 (+)
Gene ID: k141_80005_22
Type: TC
Location: 23705 - 24598 (+)
Gene ID: k141_80005_23
Type: CAZyme
Location: 24618 - 27161 (+)
Gene ID: k141_80005_24
Type: CAZyme
Location: 27137 - 28723 (+)
Gene ID: k141_80005_25
Type: CAZyme
Location: 28736 - 30997 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Robinsoniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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