Cluster: CGMR018611_CGC50
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR018611
- CGC Family ID: CGCFAM_00871
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_3931 | k141_3931_8 | 6854 | 8170 | + | GH1 |
| pfam | k141_3931 | k141_3931_9 | 8198 | 9688 | + | MFS_2 |
| CAZyme | k141_3931 | k141_3931_10 | 9713 | 12244 | + | CBM67 | GH78 |
| CAZyme | k141_3931 | k141_3931_11 | 12261 | 14501 | + | GH2 |
| pfam | k141_3931 | k141_3931_12 | 14515 | 15378 | + | AP_endonuc_2 |
| NULL(UNKNOWN) | k141_3931 | k141_3931_13 | 15433 | 17007 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_3931 | k141_3931_14 | 17244 | 18185 | + | 3.A.1.1.10 |
| TC | k141_3931 | k141_3931_15 | 18185 | 19078 | + | 3.A.1.1.10 |
Gene ID: k141_3931_8
Type: CAZyme
Location: 6854 - 8170 (+)
Type: CAZyme
Location: 6854 - 8170 (+)
Gene ID: k141_3931_9
Type: pfam
Location: 8198 - 9688 (+)
Type: pfam
Location: 8198 - 9688 (+)
Gene ID: k141_3931_10
Type: CAZyme
Location: 9713 - 12244 (+)
Type: CAZyme
Location: 9713 - 12244 (+)
Gene ID: k141_3931_11
Type: CAZyme
Location: 12261 - 14501 (+)
Type: CAZyme
Location: 12261 - 14501 (+)
Gene ID: k141_3931_12
Type: pfam
Location: 14515 - 15378 (+)
Type: pfam
Location: 14515 - 15378 (+)
Gene ID: k141_3931_13
Type:
Location: 15433 - 17007 (+)
Type:
Location: 15433 - 17007 (+)
Gene ID: k141_3931_14
Type: TC
Location: 17244 - 18185 (+)
Type: TC
Location: 17244 - 18185 (+)
Gene ID: k141_3931_15
Type: TC
Location: 18185 - 19078 (+)
Type: TC
Location: 18185 - 19078 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.