Cluster: CGMR018611_CGC48
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR018611
- CGC Family ID: CGCFAM_04989
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_8413 | k141_8413_19 | 26092 | 26970 | + | 2.A.115.1.2 |
| pfam | k141_8413 | k141_8413_20 | 27118 | 28206 | + | HTH_30 | GGDEF_2 |
| TC | k141_8413 | k141_8413_21 | 28505 | 29761 | + | 9.B.174.1.2 |
| STP | k141_8413 | k141_8413_22 | 29783 | 30631 | + | Sigma70_r3 |
| CAZyme | k141_8413 | k141_8413_23 | 30772 | 37494 | + | CBM71 | GH2 |
| TC | k141_8413 | k141_8413_24 | 37645 | 38964 | - | 9.A.40.2.4 |
Gene ID: k141_8413_19
Type: TC
Location: 26092 - 26970 (+)
Type: TC
Location: 26092 - 26970 (+)
Gene ID: k141_8413_20
Type: pfam
Location: 27118 - 28206 (+)
Type: pfam
Location: 27118 - 28206 (+)
Gene ID: k141_8413_21
Type: TC
Location: 28505 - 29761 (+)
Type: TC
Location: 28505 - 29761 (+)
Gene ID: k141_8413_22
Type: STP
Location: 29783 - 30631 (+)
Type: STP
Location: 29783 - 30631 (+)
Gene ID: k141_8413_23
Type: CAZyme
Location: 30772 - 37494 (+)
Type: CAZyme
Location: 30772 - 37494 (+)
Gene ID: k141_8413_24
Type: TC
Location: 37645 - 38964 (-)
Type: TC
Location: 37645 - 38964 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.