Cluster: CGMR018611_CGC42
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR018611
- CGC Family ID: CGCFAM_04995
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_30588 | k141_30588_35 | 44751 | 46256 | + | 3.A.1.2.20 |
| TC | k141_30588 | k141_30588_36 | 46234 | 47199 | + | 3.A.1.2.1 |
| CAZyme | k141_30588 | k141_30588_37 | 47268 | 48443 | + | GH179 |
| TF | k141_30588 | k141_30588_38 | 48544 | 50577 | - | LacI |
| pfam | k141_30588 | k141_30588_39 | 50724 | 52238 | - | FGGY_N | FGGY_C |
| CAZyme | k141_30588 | k141_30588_40 | 52539 | 55433 | + | CBM67 | GH78 |
Gene ID: k141_30588_35
Type: TC
Location: 44751 - 46256 (+)
Type: TC
Location: 44751 - 46256 (+)
Gene ID: k141_30588_36
Type: TC
Location: 46234 - 47199 (+)
Type: TC
Location: 46234 - 47199 (+)
Gene ID: k141_30588_37
Type: CAZyme
Location: 47268 - 48443 (+)
Type: CAZyme
Location: 47268 - 48443 (+)
Gene ID: k141_30588_38
Type: TF
Location: 48544 - 50577 (-)
Type: TF
Location: 48544 - 50577 (-)
Gene ID: k141_30588_39
Type: pfam
Location: 50724 - 52238 (-)
Type: pfam
Location: 50724 - 52238 (-)
Gene ID: k141_30588_40
Type: CAZyme
Location: 52539 - 55433 (+)
Type: CAZyme
Location: 52539 - 55433 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.