Cluster: CGMR018611_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR018611
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_55036 | k141_55036_39 | 52597 | 53856 | - | 2.A.49.9.2 |
| pfam | k141_55036 | k141_55036_40 | 54104 | 54859 | + | Exo_endo_phos |
| TC | k141_55036 | k141_55036_41 | 54875 | 56677 | + | 3.A.1.120.6 |
| CAZyme | k141_55036 | k141_55036_42 | 56680 | 58578 | + | GH13_11 |
Gene ID: k141_55036_39
Type: TC
Location: 52597 - 53856 (-)
Type: TC
Location: 52597 - 53856 (-)
Gene ID: k141_55036_40
Type: pfam
Location: 54104 - 54859 (+)
Type: pfam
Location: 54104 - 54859 (+)
Gene ID: k141_55036_41
Type: TC
Location: 54875 - 56677 (+)
Type: TC
Location: 54875 - 56677 (+)
Gene ID: k141_55036_42
Type: CAZyme
Location: 56680 - 58578 (+)
Type: CAZyme
Location: 56680 - 58578 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_55036_40 | vegan > omnivore | 1.29865 | 0.00842 |
| k141_55036_40 | vegetarian > omnivore | 1.23974 | 0.00842 |