Cluster: CGMR018611_CGC39
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR018611
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_23398 | k141_23398_5 | 4955 | 6655 | + | GH18 |
| pfam | k141_23398 | k141_23398_6 | 6850 | 7593 | + | Amidase_3 |
| TF | k141_23398 | k141_23398_7 | 7815 | 9446 | + | HTH_AraC | HTH_AraC |
| TC | k141_23398 | k141_23398_8 | 9443 | 10369 | + | 8.A.59.2.1 |
| pfam | k141_23398 | k141_23398_9 | 10373 | 11737 | + | ABC_tran |
| pfam | k141_23398 | k141_23398_10 | 11844 | 12932 | + | Peripla_BP_4 |
| TC | k141_23398 | k141_23398_11 | 13000 | 14478 | + | 3.A.1.2.20 |
| TC | k141_23398 | k141_23398_12 | 14490 | 15497 | + | 3.A.1.2.15 |
Gene ID: k141_23398_5
Type: CAZyme
Location: 4955 - 6655 (+)
Type: CAZyme
Location: 4955 - 6655 (+)
Gene ID: k141_23398_6
Type: pfam
Location: 6850 - 7593 (+)
Type: pfam
Location: 6850 - 7593 (+)
Gene ID: k141_23398_7
Type: TF
Location: 7815 - 9446 (+)
Type: TF
Location: 7815 - 9446 (+)
Gene ID: k141_23398_8
Type: TC
Location: 9443 - 10369 (+)
Type: TC
Location: 9443 - 10369 (+)
Gene ID: k141_23398_9
Type: pfam
Location: 10373 - 11737 (+)
Type: pfam
Location: 10373 - 11737 (+)
Gene ID: k141_23398_10
Type: pfam
Location: 11844 - 12932 (+)
Type: pfam
Location: 11844 - 12932 (+)
Gene ID: k141_23398_11
Type: TC
Location: 13000 - 14478 (+)
Type: TC
Location: 13000 - 14478 (+)
Gene ID: k141_23398_12
Type: TC
Location: 14490 - 15497 (+)
Type: TC
Location: 14490 - 15497 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.