Cluster: CGMR018611_CGC36
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR018611
- CGC Family ID: CGCFAM_07570
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_48486 | k141_48486_32 | 37565 | 38413 | + | 3.A.1.132.1 |
| NULL(UNKNOWN) | k141_48486 | k141_48486_33 | 38425 | 39180 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_48486 | k141_48486_34 | 39194 | 39946 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_48486 | k141_48486_35 | 40025 | 40960 | - | 2.A.19.5.2 |
| pfam | k141_48486 | k141_48486_36 | 41231 | 41812 | + | Methyltransf_5 | rRNA_methylase | Methyltransf_31 |
| pfam | k141_48486 | k141_48486_37 | 41837 | 42511 | + | PseudoU_synth_2 |
| TC | k141_48486 | k141_48486_38 | 42670 | 43719 | + | 2.A.86.1.3 |
| TF | k141_48486 | k141_48486_39 | 43842 | 45446 | + | HTH_AraC | HTH_AraC |
| TC | k141_48486 | k141_48486_40 | 45450 | 47258 | + | 8.A.59.2.1 |
| TC | k141_48486 | k141_48486_41 | 47245 | 48231 | + | 3.A.1.2.20 |
| TC | k141_48486 | k141_48486_42 | 48508 | 50001 | + | 3.A.1.2.20 |
| TC | k141_48486 | k141_48486_43 | 50020 | 51009 | + | 3.A.1.2.11 |
| pfam | k141_48486 | k141_48486_44 | 51101 | 52306 | + | Peripla_BP_1 | Peripla_BP_4 |
| CAZyme | k141_48486 | k141_48486_45 | 52509 | 58598 | + | GH29 |
Gene ID: k141_48486_32
Type: TC
Location: 37565 - 38413 (+)
Type: TC
Location: 37565 - 38413 (+)
Gene ID: k141_48486_33
Type:
Location: 38425 - 39180 (+)
Type:
Location: 38425 - 39180 (+)
Gene ID: k141_48486_34
Type:
Location: 39194 - 39946 (+)
Type:
Location: 39194 - 39946 (+)
Gene ID: k141_48486_35
Type: TC
Location: 40025 - 40960 (-)
Type: TC
Location: 40025 - 40960 (-)
Gene ID: k141_48486_36
Type: pfam
Location: 41231 - 41812 (+)
Type: pfam
Location: 41231 - 41812 (+)
Gene ID: k141_48486_37
Type: pfam
Location: 41837 - 42511 (+)
Type: pfam
Location: 41837 - 42511 (+)
Gene ID: k141_48486_38
Type: TC
Location: 42670 - 43719 (+)
Type: TC
Location: 42670 - 43719 (+)
Gene ID: k141_48486_39
Type: TF
Location: 43842 - 45446 (+)
Type: TF
Location: 43842 - 45446 (+)
Gene ID: k141_48486_40
Type: TC
Location: 45450 - 47258 (+)
Type: TC
Location: 45450 - 47258 (+)
Gene ID: k141_48486_41
Type: TC
Location: 47245 - 48231 (+)
Type: TC
Location: 47245 - 48231 (+)
Gene ID: k141_48486_42
Type: TC
Location: 48508 - 50001 (+)
Type: TC
Location: 48508 - 50001 (+)
Gene ID: k141_48486_43
Type: TC
Location: 50020 - 51009 (+)
Type: TC
Location: 50020 - 51009 (+)
Gene ID: k141_48486_44
Type: pfam
Location: 51101 - 52306 (+)
Type: pfam
Location: 51101 - 52306 (+)
Gene ID: k141_48486_45
Type: CAZyme
Location: 52509 - 58598 (+)
Type: CAZyme
Location: 52509 - 58598 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.