Cluster: CGMR018611_CGC35
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR018611
- CGC Family ID: CGCFAM_00799
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_56622 | k141_56622_29 | 27352 | 28239 | + | 3.A.1.1.25 |
| TC | k141_56622 | k141_56622_30 | 28239 | 29072 | + | 3.A.1.1.25 |
| pfam | k141_56622 | k141_56622_31 | 29242 | 30390 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| CAZyme | k141_56622 | k141_56622_32 | 30394 | 32682 | + | CBM40 | GH33 |
| pfam | k141_56622 | k141_56622_33 | 32762 | 33688 | + | DHDPS |
| TC | k141_56622 | k141_56622_34 | 33844 | 34425 | - | 2.A.76.1.4 |
Gene ID: k141_56622_29
Type: TC
Location: 27352 - 28239 (+)
Type: TC
Location: 27352 - 28239 (+)
Gene ID: k141_56622_30
Type: TC
Location: 28239 - 29072 (+)
Type: TC
Location: 28239 - 29072 (+)
Gene ID: k141_56622_31
Type: pfam
Location: 29242 - 30390 (+)
Type: pfam
Location: 29242 - 30390 (+)
Gene ID: k141_56622_32
Type: CAZyme
Location: 30394 - 32682 (+)
Type: CAZyme
Location: 30394 - 32682 (+)
Gene ID: k141_56622_33
Type: pfam
Location: 32762 - 33688 (+)
Type: pfam
Location: 32762 - 33688 (+)
Gene ID: k141_56622_34
Type: TC
Location: 33844 - 34425 (-)
Type: TC
Location: 33844 - 34425 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.