dbCAN Logo

Cluster: CGMR018611_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_69420 k141_69420_10 9232 14154 + CBM35 | CBM66 | GH43_26 | GH43_31
pfam k141_69420 k141_69420_11 14219 15070 - YitT_membrane | DUF2179
TC k141_69420 k141_69420_12 15347 17134 + 8.A.59.2.1
TF k141_69420 k141_69420_13 17115 18707 + HTH_AraC | HTH_AraC
STP k141_69420 k141_69420_14 18882 20240 + SBP_bac_1
CAZyme k141_69420 k141_69420_15 20267 25087 + CBM32 | CBM32 | CBM32 | GH140
STP k141_69420 k141_69420_16 25370 26707 + SBP_bac_1
TC k141_69420 k141_69420_17 26730 27611 + 3.A.1.1.7
TC k141_69420 k141_69420_18 27613 28440 + 3.A.1.1.47
Gene ID: k141_69420_10
Type: CAZyme
Location: 9232 - 14154 (+)
Gene ID: k141_69420_11
Type: pfam
Location: 14219 - 15070 (-)
Gene ID: k141_69420_12
Type: TC
Location: 15347 - 17134 (+)
Gene ID: k141_69420_13
Type: TF
Location: 17115 - 18707 (+)
Gene ID: k141_69420_14
Type: STP
Location: 18882 - 20240 (+)
Gene ID: k141_69420_15
Type: CAZyme
Location: 20267 - 25087 (+)
Gene ID: k141_69420_16
Type: STP
Location: 25370 - 26707 (+)
Gene ID: k141_69420_17
Type: TC
Location: 26730 - 27611 (+)
Gene ID: k141_69420_18
Type: TC
Location: 27613 - 28440 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Robinsoniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List