Cluster: CGMR018611_CGC152
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR018611
- CGC Family ID: CGCFAM_02101
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2271 | k141_2271_2 | 528 | 1445 | + | 8.A.5.1.7 |
| pfam | k141_2271 | k141_2271_3 | 1494 | 2903 | - | Pyridoxal_deC |
| CAZyme | k141_2271 | k141_2271_4 | 3174 | 4604 | - | GH29 |
| CAZyme | k141_2271 | k141_2271_5 | 4632 | 6062 | - | CE20 |
| NULL(UNKNOWN) | k141_2271 | k141_2271_6 | 6075 | 7718 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_2271 | k141_2271_7 | 7722 | 8477 | - | HTH_AraC | HTH_AraC |
| TC | k141_2271 | k141_2271_8 | 8483 | 10300 | - | 8.A.59.2.1 |
| TC | k141_2271 | k141_2271_9 | 10734 | 11690 | + | 3.A.1.1.10 |
| TC | k141_2271 | k141_2271_10 | 11728 | 12621 | + | 3.A.1.1.10 |
| STP | k141_2271 | k141_2271_11 | 12666 | 14408 | + | SBP_bac_1 |
| CAZyme | k141_2271 | k141_2271_12 | 14731 | 17433 | + | CBM67 | GH78 |
| CAZyme | k141_2271 | k141_2271_13 | 17485 | 20178 | + | GH106 |
| CAZyme | k141_2271 | k141_2271_14 | 20265 | 22334 | + | GH42 |
Gene ID: k141_2271_2
Type: TC
Location: 528 - 1445 (+)
Type: TC
Location: 528 - 1445 (+)
Gene ID: k141_2271_3
Type: pfam
Location: 1494 - 2903 (-)
Type: pfam
Location: 1494 - 2903 (-)
Gene ID: k141_2271_4
Type: CAZyme
Location: 3174 - 4604 (-)
Type: CAZyme
Location: 3174 - 4604 (-)
Gene ID: k141_2271_5
Type: CAZyme
Location: 4632 - 6062 (-)
Type: CAZyme
Location: 4632 - 6062 (-)
Gene ID: k141_2271_6
Type:
Location: 6075 - 7718 (-)
Type:
Location: 6075 - 7718 (-)
Gene ID: k141_2271_7
Type: TF
Location: 7722 - 8477 (-)
Type: TF
Location: 7722 - 8477 (-)
Gene ID: k141_2271_8
Type: TC
Location: 8483 - 10300 (-)
Type: TC
Location: 8483 - 10300 (-)
Gene ID: k141_2271_9
Type: TC
Location: 10734 - 11690 (+)
Type: TC
Location: 10734 - 11690 (+)
Gene ID: k141_2271_10
Type: TC
Location: 11728 - 12621 (+)
Type: TC
Location: 11728 - 12621 (+)
Gene ID: k141_2271_11
Type: STP
Location: 12666 - 14408 (+)
Type: STP
Location: 12666 - 14408 (+)
Gene ID: k141_2271_12
Type: CAZyme
Location: 14731 - 17433 (+)
Type: CAZyme
Location: 14731 - 17433 (+)
Gene ID: k141_2271_13
Type: CAZyme
Location: 17485 - 20178 (+)
Type: CAZyme
Location: 17485 - 20178 (+)
Gene ID: k141_2271_14
Type: CAZyme
Location: 20265 - 22334 (+)
Type: CAZyme
Location: 20265 - 22334 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.