Cluster: CGMR018611_CGC142
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR018611
- CGC Family ID: CGCFAM_01405
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_7775 | k141_7775_13 | 13591 | 14469 | - | 3.A.1.126.1 |
| STP | k141_7775 | k141_7775_14 | 14466 | 15086 | - | TetR_N |
| TC | k141_7775 | k141_7775_15 | 15359 | 16768 | + | 3.A.1.1.42 |
| TC | k141_7775 | k141_7775_16 | 16840 | 17715 | + | 3.A.1.1.28 |
| TC | k141_7775 | k141_7775_17 | 17715 | 18548 | + | 3.A.1.1.28 |
| TC | k141_7775 | k141_7775_18 | 18611 | 20395 | + | 8.A.59.2.1 |
| TF | k141_7775 | k141_7775_19 | 20403 | 21947 | + | HTH_AraC |
| CAZyme | k141_7775 | k141_7775_20 | 21937 | 25203 | + | GH106 |
Gene ID: k141_7775_13
Type: TC
Location: 13591 - 14469 (-)
Type: TC
Location: 13591 - 14469 (-)
Gene ID: k141_7775_14
Type: STP
Location: 14466 - 15086 (-)
Type: STP
Location: 14466 - 15086 (-)
Gene ID: k141_7775_15
Type: TC
Location: 15359 - 16768 (+)
Type: TC
Location: 15359 - 16768 (+)
Gene ID: k141_7775_16
Type: TC
Location: 16840 - 17715 (+)
Type: TC
Location: 16840 - 17715 (+)
Gene ID: k141_7775_17
Type: TC
Location: 17715 - 18548 (+)
Type: TC
Location: 17715 - 18548 (+)
Gene ID: k141_7775_18
Type: TC
Location: 18611 - 20395 (+)
Type: TC
Location: 18611 - 20395 (+)
Gene ID: k141_7775_19
Type: TF
Location: 20403 - 21947 (+)
Type: TF
Location: 20403 - 21947 (+)
Gene ID: k141_7775_20
Type: CAZyme
Location: 21937 - 25203 (+)
Type: CAZyme
Location: 21937 - 25203 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.