Cluster: CGMR018611_CGC134
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR018611
- CGC Family ID: CGCFAM_00009
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_65153 | k141_65153_16 | 15270 | 16208 | - | GT2 |
| pfam | k141_65153 | k141_65153_17 | 16213 | 17646 | - | LytR_cpsA_psr |
| TC | k141_65153 | k141_65153_18 | 17813 | 19213 | - | 9.B.18.1.1 |
| CAZyme | k141_65153 | k141_65153_19 | 19314 | 20276 | - | GT2 |
| CAZyme | k141_65153 | k141_65153_20 | 20484 | 22466 | - | GT2 |
| STP | k141_65153 | k141_65153_21 | 22459 | 23640 | - | Aminotran_1_2 |
| pfam | k141_65153 | k141_65153_22 | 23780 | 26518 | - | YfhO |
| CAZyme | k141_65153 | k141_65153_23 | 26626 | 29073 | - | GT2 | GT2 |
| CAZyme | k141_65153 | k141_65153_24 | 29110 | 32154 | - | GT2 | GT2 |
| pfam | k141_65153 | k141_65153_25 | 32188 | 33108 | - | RrnaAD | PCMT | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | k141_65153 | k141_65153_26 | 33167 | 34462 | - | 3.A.1.103.6 |
| TC | k141_65153 | k141_65153_27 | 34478 | 35284 | - | 3.A.1.104.1 |
Gene ID: k141_65153_16
Type: CAZyme
Location: 15270 - 16208 (-)
Type: CAZyme
Location: 15270 - 16208 (-)
Gene ID: k141_65153_17
Type: pfam
Location: 16213 - 17646 (-)
Type: pfam
Location: 16213 - 17646 (-)
Gene ID: k141_65153_18
Type: TC
Location: 17813 - 19213 (-)
Type: TC
Location: 17813 - 19213 (-)
Gene ID: k141_65153_19
Type: CAZyme
Location: 19314 - 20276 (-)
Type: CAZyme
Location: 19314 - 20276 (-)
Gene ID: k141_65153_20
Type: CAZyme
Location: 20484 - 22466 (-)
Type: CAZyme
Location: 20484 - 22466 (-)
Gene ID: k141_65153_21
Type: STP
Location: 22459 - 23640 (-)
Type: STP
Location: 22459 - 23640 (-)
Gene ID: k141_65153_22
Type: pfam
Location: 23780 - 26518 (-)
Type: pfam
Location: 23780 - 26518 (-)
Gene ID: k141_65153_23
Type: CAZyme
Location: 26626 - 29073 (-)
Type: CAZyme
Location: 26626 - 29073 (-)
Gene ID: k141_65153_24
Type: CAZyme
Location: 29110 - 32154 (-)
Type: CAZyme
Location: 29110 - 32154 (-)
Gene ID: k141_65153_25
Type: pfam
Location: 32188 - 33108 (-)
Type: pfam
Location: 32188 - 33108 (-)
Gene ID: k141_65153_26
Type: TC
Location: 33167 - 34462 (-)
Type: TC
Location: 33167 - 34462 (-)
Gene ID: k141_65153_27
Type: TC
Location: 34478 - 35284 (-)
Type: TC
Location: 34478 - 35284 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.