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Cluster: CGMR018611_CGC115

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_89415 k141_89415_7 8380 9378 - 3.A.1.2.14
TF k141_89415 k141_89415_8 9409 11040 - HTH_AraC | HTH_AraC
TC k141_89415 k141_89415_9 11059 12459 - 9.B.33.1.1
NULL(UNKNOWN) k141_89415 k141_89415_10 12593 12682 - NULL(UNKNOWN)
[View Structural Homologs]
TF k141_89415 k141_89415_11 12683 14323 - HTH_AraC | HTH_AraC
TC k141_89415 k141_89415_12 14971 15990 - 3.A.1.2.25
TC k141_89415 k141_89415_13 15990 17057 - 3.A.1.2.14
TC k141_89415 k141_89415_14 17059 18570 - 3.A.1.2.23
TC k141_89415 k141_89415_15 18757 20085 - 3.A.1.2.14
TF k141_89415 k141_89415_16 20146 21783 - HTH_AraC | HTH_AraC
CAZyme k141_89415 k141_89415_17 22011 28457 - GH146
Gene ID: k141_89415_7
Type: TC
Location: 8380 - 9378 (-)
Gene ID: k141_89415_8
Type: TF
Location: 9409 - 11040 (-)
Gene ID: k141_89415_9
Type: TC
Location: 11059 - 12459 (-)
Gene ID: k141_89415_10
Type:
Location: 12593 - 12682 (-)
Gene ID: k141_89415_11
Type: TF
Location: 12683 - 14323 (-)
Gene ID: k141_89415_12
Type: TC
Location: 14971 - 15990 (-)
Gene ID: k141_89415_13
Type: TC
Location: 15990 - 17057 (-)
Gene ID: k141_89415_14
Type: TC
Location: 17059 - 18570 (-)
Gene ID: k141_89415_15
Type: TC
Location: 18757 - 20085 (-)
Gene ID: k141_89415_16
Type: TF
Location: 20146 - 21783 (-)
Gene ID: k141_89415_17
Type: CAZyme
Location: 22011 - 28457 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Robinsoniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_89415_13 vegan > omnivore 1.68847 0.02108

🧭 Explore Read Mapping of CGC

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