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Cluster: CGMR018611_CGC100

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_60182 k141_60182_42 46043 47845 + 3.A.16.1.1
CAZyme k141_60182 k141_60182_43 48117 50252 + GH13_39
TC k141_60182 k141_60182_44 50582 52000 + 3.A.1.1.9
TC k141_60182 k141_60182_45 52069 52971 + 3.A.1.1.7
TC k141_60182 k141_60182_46 52975 53823 + 3.A.1.1.34
TC k141_60182 k141_60182_47 53918 55804 + 8.A.59.2.1
TF k141_60182 k141_60182_48 55831 57390 + HTH_AraC | HTH_AraC
NULL(UNKNOWN) k141_60182 k141_60182_49 57507 57875 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_60182 k141_60182_50 57994 60201 + GH3
CAZyme k141_60182 k141_60182_51 60220 62328 + GH3
Gene ID: k141_60182_42
Type: TC
Location: 46043 - 47845 (+)
Gene ID: k141_60182_43
Type: CAZyme
Location: 48117 - 50252 (+)
Gene ID: k141_60182_44
Type: TC
Location: 50582 - 52000 (+)
Gene ID: k141_60182_45
Type: TC
Location: 52069 - 52971 (+)
Gene ID: k141_60182_46
Type: TC
Location: 52975 - 53823 (+)
Gene ID: k141_60182_47
Type: TC
Location: 53918 - 55804 (+)
Gene ID: k141_60182_48
Type: TF
Location: 55831 - 57390 (+)
Gene ID: k141_60182_49
Type:
Location: 57507 - 57875 (+)
Gene ID: k141_60182_50
Type: CAZyme
Location: 57994 - 60201 (+)
Gene ID: k141_60182_51
Type: CAZyme
Location: 60220 - 62328 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Robinsoniella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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