Cluster: CGMR018611_CGC10
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR018611
- CGC Family ID: CGCFAM_03466
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_73149 | k141_73149_7 | 7881 | 9929 | + | GH43_29 |
| STP | k141_73149 | k141_73149_8 | 10014 | 12446 | - | HTH_18 | dCache_1 |
| NULL(UNKNOWN) | k141_73149 | k141_73149_9 | 12653 | 14698 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_73149 | k141_73149_10 | 14816 | 15796 | + | 3.A.1.1.10 |
| TC | k141_73149 | k141_73149_11 | 15811 | 16701 | + | 3.A.1.1.29 |
| pfam | k141_73149 | k141_73149_12 | 16755 | 18395 | + | DUF3502 |
| pfam | k141_73149 | k141_73149_13 | 18406 | 19614 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| CAZyme | k141_73149 | k141_73149_14 | 19768 | 24558 | + | GH141 |
| CAZyme | k141_73149 | k141_73149_15 | 24887 | 31207 | + | CBM32 |
| TC | k141_73149 | k141_73149_16 | 31549 | 33309 | + | 8.A.59.2.1 |
| TC | k141_73149 | k141_73149_17 | 33499 | 34407 | + | 3.A.1.1.29 |
| TC | k141_73149 | k141_73149_18 | 34423 | 35316 | + | 3.A.1.1.29 |
| STP | k141_73149 | k141_73149_19 | 35392 | 36927 | + | SBP_bac_1 |
| CAZyme | k141_73149 | k141_73149_20 | 37309 | 39054 | + | GH154 |
Gene ID: k141_73149_7
Type: CAZyme
Location: 7881 - 9929 (+)
Type: CAZyme
Location: 7881 - 9929 (+)
Gene ID: k141_73149_8
Type: STP
Location: 10014 - 12446 (-)
Type: STP
Location: 10014 - 12446 (-)
Gene ID: k141_73149_9
Type:
Location: 12653 - 14698 (+)
Type:
Location: 12653 - 14698 (+)
Gene ID: k141_73149_10
Type: TC
Location: 14816 - 15796 (+)
Type: TC
Location: 14816 - 15796 (+)
Gene ID: k141_73149_11
Type: TC
Location: 15811 - 16701 (+)
Type: TC
Location: 15811 - 16701 (+)
Gene ID: k141_73149_12
Type: pfam
Location: 16755 - 18395 (+)
Type: pfam
Location: 16755 - 18395 (+)
Gene ID: k141_73149_13
Type: pfam
Location: 18406 - 19614 (+)
Type: pfam
Location: 18406 - 19614 (+)
Gene ID: k141_73149_14
Type: CAZyme
Location: 19768 - 24558 (+)
Type: CAZyme
Location: 19768 - 24558 (+)
Gene ID: k141_73149_15
Type: CAZyme
Location: 24887 - 31207 (+)
Type: CAZyme
Location: 24887 - 31207 (+)
Gene ID: k141_73149_16
Type: TC
Location: 31549 - 33309 (+)
Type: TC
Location: 31549 - 33309 (+)
Gene ID: k141_73149_17
Type: TC
Location: 33499 - 34407 (+)
Type: TC
Location: 33499 - 34407 (+)
Gene ID: k141_73149_18
Type: TC
Location: 34423 - 35316 (+)
Type: TC
Location: 34423 - 35316 (+)
Gene ID: k141_73149_19
Type: STP
Location: 35392 - 36927 (+)
Type: STP
Location: 35392 - 36927 (+)
Gene ID: k141_73149_20
Type: CAZyme
Location: 37309 - 39054 (+)
Type: CAZyme
Location: 37309 - 39054 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.