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Cluster: CGMR018262_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6510 k141_6510_2 2116 3816 + 1.B.17.3.8
TC k141_6510 k141_6510_3 3838 4878 + 3.A.1.105.4
TC k141_6510 k141_6510_4 4888 6687 + 3.A.1.105.4
TC k141_6510 k141_6510_5 6684 7796 + 3.A.1.105.4
TC k141_6510 k141_6510_6 7796 8911 + 3.A.1.105.4
pfam k141_6510 k141_6510_7 9902 13192 + DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter
TC k141_6510 k141_6510_8 13189 14793 + 2.A.66.2.14
pfam k141_6510 k141_6510_9 14777 15556 + MazG | MazG
pfam k141_6510 k141_6510_10 15609 15908 + Bac_DNA_binding | HU-HIG
CAZyme k141_6510 k141_6510_11 16006 17160 + GT28
NULL(UNKNOWN) k141_6510 k141_6510_12 17257 17577 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_6510 k141_6510_13 17717 19672 + 3.A.1.120.6
STP k141_6510 k141_6510_14 19804 21273 + Fer4
NULL(UNKNOWN) k141_6510 k141_6510_15 21377 21553 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_6510 k141_6510_16 21758 22213 + 4.A.7.1.1
TC k141_6510 k141_6510_17 22229 22504 + 4.A.7.1.2
TC k141_6510 k141_6510_18 22525 23892 + 4.A.7.1.4
pfam k141_6510 k141_6510_19 23892 24287 + DUF454
TF k141_6510 k141_6510_20 24501 25391 + HTH_AraC
TC k141_6510 k141_6510_21 25591 30657 + 1.B.14.1.4
TC k141_6510 k141_6510_22 30694 31311 + 1.A.30.2.4
Gene ID: k141_6510_2
Type: TC
Location: 2116 - 3816 (+)
Gene ID: k141_6510_3
Type: TC
Location: 3838 - 4878 (+)
Gene ID: k141_6510_4
Type: TC
Location: 4888 - 6687 (+)
Gene ID: k141_6510_5
Type: TC
Location: 6684 - 7796 (+)
Gene ID: k141_6510_6
Type: TC
Location: 7796 - 8911 (+)
Gene ID: k141_6510_7
Type: pfam
Location: 9902 - 13192 (+)
Gene ID: k141_6510_8
Type: TC
Location: 13189 - 14793 (+)
Gene ID: k141_6510_9
Type: pfam
Location: 14777 - 15556 (+)
Gene ID: k141_6510_10
Type: pfam
Location: 15609 - 15908 (+)
Gene ID: k141_6510_11
Type: CAZyme
Location: 16006 - 17160 (+)
Gene ID: k141_6510_12
Type:
Location: 17257 - 17577 (-)
Gene ID: k141_6510_13
Type: TC
Location: 17717 - 19672 (+)
Gene ID: k141_6510_14
Type: STP
Location: 19804 - 21273 (+)
Gene ID: k141_6510_15
Type:
Location: 21377 - 21553 (+)
Gene ID: k141_6510_16
Type: TC
Location: 21758 - 22213 (+)
Gene ID: k141_6510_17
Type: TC
Location: 22229 - 22504 (+)
Gene ID: k141_6510_18
Type: TC
Location: 22525 - 23892 (+)
Gene ID: k141_6510_19
Type: pfam
Location: 23892 - 24287 (+)
Gene ID: k141_6510_20
Type: TF
Location: 24501 - 25391 (+)
Gene ID: k141_6510_21
Type: TC
Location: 25591 - 30657 (+)
Gene ID: k141_6510_22
Type: TC
Location: 30694 - 31311 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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