Cluster: CGMR017874_CGC3
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR017874
- CGC Family ID: CGCFAM_00397
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_46323 | k141_46323_11 | 11269 | 13062 | - | 9.B.18.2.1 |
| STP | k141_46323 | k141_46323_12 | 13059 | 14156 | - | Aminotran_1_2 |
| pfam | k141_46323 | k141_46323_13 | 14217 | 14804 | - | PglD_N |
| TC | k141_46323 | k141_46323_14 | 14791 | 15396 | - | 9.B.18.1.2 |
| CAZyme | k141_46323 | k141_46323_15 | 15389 | 16504 | - | GT4 |
| CAZyme | k141_46323 | k141_46323_16 | 16570 | 18759 | - | GT66 |
| CAZyme | k141_46323 | k141_46323_17 | 18752 | 19864 | - | GT4 |
| CAZyme | k141_46323 | k141_46323_18 | 19861 | 20904 | - | GT4 |
| CAZyme | k141_46323 | k141_46323_19 | 20901 | 21878 | - | GT2 |
| CAZyme | k141_46323 | k141_46323_20 | 21862 | 22938 | - | GT4 |
| CAZyme | k141_46323 | k141_46323_21 | 22935 | 23855 | - | GT2 |
Gene ID: k141_46323_11
Type: TC
Location: 11269 - 13062 (-)
Type: TC
Location: 11269 - 13062 (-)
Gene ID: k141_46323_12
Type: STP
Location: 13059 - 14156 (-)
Type: STP
Location: 13059 - 14156 (-)
Gene ID: k141_46323_13
Type: pfam
Location: 14217 - 14804 (-)
Type: pfam
Location: 14217 - 14804 (-)
Gene ID: k141_46323_14
Type: TC
Location: 14791 - 15396 (-)
Type: TC
Location: 14791 - 15396 (-)
Gene ID: k141_46323_15
Type: CAZyme
Location: 15389 - 16504 (-)
Type: CAZyme
Location: 15389 - 16504 (-)
Gene ID: k141_46323_16
Type: CAZyme
Location: 16570 - 18759 (-)
Type: CAZyme
Location: 16570 - 18759 (-)
Gene ID: k141_46323_17
Type: CAZyme
Location: 18752 - 19864 (-)
Type: CAZyme
Location: 18752 - 19864 (-)
Gene ID: k141_46323_18
Type: CAZyme
Location: 19861 - 20904 (-)
Type: CAZyme
Location: 19861 - 20904 (-)
Gene ID: k141_46323_19
Type: CAZyme
Location: 20901 - 21878 (-)
Type: CAZyme
Location: 20901 - 21878 (-)
Gene ID: k141_46323_20
Type: CAZyme
Location: 21862 - 22938 (-)
Type: CAZyme
Location: 21862 - 22938 (-)
Gene ID: k141_46323_21
Type: CAZyme
Location: 22935 - 23855 (-)
Type: CAZyme
Location: 22935 - 23855 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_B
Species
Campylobacter_B hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.