Cluster: CGMR017842_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR017842
- CGC Family ID: CGCFAM_02122
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_51788 | k141_51788_11 | 14743 | 15909 | - | CE9 |
| TF | k141_51788 | k141_51788_12 | 16104 | 16919 | + | HTH_AraC | HTH_AraC |
| TC | k141_51788 | k141_51788_13 | 16932 | 17687 | + | 2.A.5.5.2 |
| pfam | k141_51788 | k141_51788_14 | 18002 | 18832 | - | AP_endonuc_2 |
| CAZyme | k141_51788 | k141_51788_15 | 18835 | 19896 | - | GH179 |
Gene ID: k141_51788_11
Type: CAZyme
Location: 14743 - 15909 (-)
Type: CAZyme
Location: 14743 - 15909 (-)
Gene ID: k141_51788_12
Type: TF
Location: 16104 - 16919 (+)
Type: TF
Location: 16104 - 16919 (+)
Gene ID: k141_51788_13
Type: TC
Location: 16932 - 17687 (+)
Type: TC
Location: 16932 - 17687 (+)
Gene ID: k141_51788_14
Type: pfam
Location: 18002 - 18832 (-)
Type: pfam
Location: 18002 - 18832 (-)
Gene ID: k141_51788_15
Type: CAZyme
Location: 18835 - 19896 (-)
Type: CAZyme
Location: 18835 - 19896 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.