Cluster: CGMR017842_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR017842
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1131742 | k141_1131742_221 | 237294 | 238058 | + | 2.A.79.1.5 |
| TC | k141_1131742 | k141_1131742_222 | 238070 | 238537 | + | 2.A.79.1.7 |
| pfam | k141_1131742 | k141_1131742_223 | 238527 | 239612 | + | Lipase_GDSL_2 | Lipase_GDSL_3 | GxDLY |
| pfam | k141_1131742 | k141_1131742_224 | 240014 | 240376 | + | 23S_rRNA_IVP |
| CAZyme | k141_1131742 | k141_1131742_225 | 240527 | 241927 | + | GH39 |
| TC | k141_1131742 | k141_1131742_226 | 241942 | 243051 | + | 2.A.45.2.6 |
Gene ID: k141_1131742_221
Type: TC
Location: 237294 - 238058 (+)
Type: TC
Location: 237294 - 238058 (+)
Gene ID: k141_1131742_222
Type: TC
Location: 238070 - 238537 (+)
Type: TC
Location: 238070 - 238537 (+)
Gene ID: k141_1131742_223
Type: pfam
Location: 238527 - 239612 (+)
Type: pfam
Location: 238527 - 239612 (+)
Gene ID: k141_1131742_224
Type: pfam
Location: 240014 - 240376 (+)
Type: pfam
Location: 240014 - 240376 (+)
Gene ID: k141_1131742_225
Type: CAZyme
Location: 240527 - 241927 (+)
Type: CAZyme
Location: 240527 - 241927 (+)
Gene ID: k141_1131742_226
Type: TC
Location: 241942 - 243051 (+)
Type: TC
Location: 241942 - 243051 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.