Cluster: CGMR017842_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR017842
- CGC Family ID: CGCFAM_00060
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1435069 | k141_1435069_48 | 44037 | 44921 | + | 3.A.1.15.3 |
| TC | k141_1435069 | k141_1435069_49 | 44914 | 45576 | + | 3.A.1.15.8 |
| TC | k141_1435069 | k141_1435069_50 | 45569 | 46387 | + | 3.A.1.15.15 |
| pfam | k141_1435069 | k141_1435069_51 | 46419 | 47210 | + | Polysacc_deac_1 |
| pfam | k141_1435069 | k141_1435069_52 | 47226 | 48236 | + | adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd |
| CAZyme | k141_1435069 | k141_1435069_53 | 48256 | 49563 | + | GH28 |
Gene ID: k141_1435069_48
Type: TC
Location: 44037 - 44921 (+)
Type: TC
Location: 44037 - 44921 (+)
Gene ID: k141_1435069_49
Type: TC
Location: 44914 - 45576 (+)
Type: TC
Location: 44914 - 45576 (+)
Gene ID: k141_1435069_50
Type: TC
Location: 45569 - 46387 (+)
Type: TC
Location: 45569 - 46387 (+)
Gene ID: k141_1435069_51
Type: pfam
Location: 46419 - 47210 (+)
Type: pfam
Location: 46419 - 47210 (+)
Gene ID: k141_1435069_52
Type: pfam
Location: 47226 - 48236 (+)
Type: pfam
Location: 47226 - 48236 (+)
Gene ID: k141_1435069_53
Type: CAZyme
Location: 48256 - 49563 (+)
Type: CAZyme
Location: 48256 - 49563 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.