Cluster: CGMR017842_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: CGMR017842
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_23587 | k141_23587_33 | 42343 | 43935 | - | 2.A.36.6.11 |
| CAZyme | k141_23587 | k141_23587_34 | 43936 | 45786 | - | GH13_39 |
| CAZyme | k141_23587 | k141_23587_35 | 45806 | 48217 | - | GT35 |
| CAZyme | k141_23587 | k141_23587_36 | 48314 | 49768 | - | GT5 |
| pfam | k141_23587 | k141_23587_37 | 49799 | 50917 | - | NTP_transferase | Hexapep_GlmU |
| pfam | k141_23587 | k141_23587_38 | 50932 | 52110 | - | NTP_transferase | Hexapep_GlmU |
| TC | k141_23587 | k141_23587_39 | 52284 | 53258 | - | 1.A.34.1.1 |
Gene ID: k141_23587_33
Type: TC
Location: 42343 - 43935 (-)
Type: TC
Location: 42343 - 43935 (-)
Gene ID: k141_23587_34
Type: CAZyme
Location: 43936 - 45786 (-)
Type: CAZyme
Location: 43936 - 45786 (-)
Gene ID: k141_23587_35
Type: CAZyme
Location: 45806 - 48217 (-)
Type: CAZyme
Location: 45806 - 48217 (-)
Gene ID: k141_23587_36
Type: CAZyme
Location: 48314 - 49768 (-)
Type: CAZyme
Location: 48314 - 49768 (-)
Gene ID: k141_23587_37
Type: pfam
Location: 49799 - 50917 (-)
Type: pfam
Location: 49799 - 50917 (-)
Gene ID: k141_23587_38
Type: pfam
Location: 50932 - 52110 (-)
Type: pfam
Location: 50932 - 52110 (-)
Gene ID: k141_23587_39
Type: TC
Location: 52284 - 53258 (-)
Type: TC
Location: 52284 - 53258 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.