Cluster: CGMR017842_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR017842
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1133646 | k141_1133646_4 | 5294 | 8512 | + | CBM32 | PL21_1 |
| CAZyme | k141_1133646 | k141_1133646_5 | 8525 | 9583 | + | GH109 |
| pfam | k141_1133646 | k141_1133646_6 | 9596 | 10387 | + | PHP |
| TC | k141_1133646 | k141_1133646_7 | 10798 | 12402 | + | 3.A.1.1.10 |
| TC | k141_1133646 | k141_1133646_8 | 12421 | 13389 | + | 3.A.1.1.10 |
| TC | k141_1133646 | k141_1133646_9 | 13405 | 14283 | + | 3.A.1.1.10 |
Gene ID: k141_1133646_4
Type: CAZyme
Location: 5294 - 8512 (+)
Type: CAZyme
Location: 5294 - 8512 (+)
Gene ID: k141_1133646_5
Type: CAZyme
Location: 8525 - 9583 (+)
Type: CAZyme
Location: 8525 - 9583 (+)
Gene ID: k141_1133646_6
Type: pfam
Location: 9596 - 10387 (+)
Type: pfam
Location: 9596 - 10387 (+)
Gene ID: k141_1133646_7
Type: TC
Location: 10798 - 12402 (+)
Type: TC
Location: 10798 - 12402 (+)
Gene ID: k141_1133646_8
Type: TC
Location: 12421 - 13389 (+)
Type: TC
Location: 12421 - 13389 (+)
Gene ID: k141_1133646_9
Type: TC
Location: 13405 - 14283 (+)
Type: TC
Location: 13405 - 14283 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.