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Cluster: CGMR017821_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_117550 k141_117550_24 23019 23792 - 3.A.1.34.1
TC k141_117550 k141_117550_25 23785 24672 - 3.A.1.34.1
TC k141_117550 k141_117550_26 24786 25781 - 3.A.1.34.1
STP k141_117550 k141_117550_27 26356 27531 + Aminotran_1_2
TC k141_117550 k141_117550_28 27867 29951 + 2.A.6.5.1
TC k141_117550 k141_117550_29 29954 32617 + 9.B.74.1.4
TF k141_117550 k141_117550_30 32810 34849 + HTH_AraC
STP k141_117550 k141_117550_31 34971 36539 + SBP_bac_1
TC k141_117550 k141_117550_32 36625 37560 + 3.A.1.1.10
TC k141_117550 k141_117550_33 37576 38454 + 3.A.1.1.29
CAZyme k141_117550 k141_117550_34 38482 39498 + CE19
pfam k141_117550 k141_117550_35 39535 40623 + PGA_cap
sulfatase k141_117550 k141_117550_36 40706 42772 + S1_4
CAZyme k141_117550 k141_117550_37 42855 44129 + GH29
Gene ID: k141_117550_24
Type: TC
Location: 23019 - 23792 (-)
Gene ID: k141_117550_25
Type: TC
Location: 23785 - 24672 (-)
Gene ID: k141_117550_26
Type: TC
Location: 24786 - 25781 (-)
Gene ID: k141_117550_27
Type: STP
Location: 26356 - 27531 (+)
Gene ID: k141_117550_28
Type: TC
Location: 27867 - 29951 (+)
Gene ID: k141_117550_29
Type: TC
Location: 29954 - 32617 (+)
Gene ID: k141_117550_30
Type: TF
Location: 32810 - 34849 (+)
Gene ID: k141_117550_31
Type: STP
Location: 34971 - 36539 (+)
Gene ID: k141_117550_32
Type: TC
Location: 36625 - 37560 (+)
Gene ID: k141_117550_33
Type: TC
Location: 37576 - 38454 (+)
Gene ID: k141_117550_34
Type: CAZyme
Location: 38482 - 39498 (+)
Gene ID: k141_117550_35
Type: pfam
Location: 39535 - 40623 (+)
Gene ID: k141_117550_36
Type: sulfatase
Location: 40706 - 42772 (+)
Gene ID: k141_117550_37
Type: CAZyme
Location: 42855 - 44129 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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