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Cluster: CGMR017821_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_233894 k141_233894_4 1919 2950 - 3.D.6.1.3
TC k141_233894 k141_233894_5 2964 3539 - 3.D.6.1.2
TC k141_233894 k141_233894_6 3541 4167 - 3.D.6.1.2
pfam k141_233894 k141_233894_7 4167 5567 - FMN_bind | FMN_bind
TC k141_233894 k141_233894_8 5560 6528 - 3.D.6.1.2
TC k141_233894 k141_233894_9 6543 7877 - 3.D.6.1.2
CAZyme k141_233894 k141_233894_10 8335 9345 + GH29
CAZyme k141_233894 k141_233894_11 9435 10769 + GH30_1
pfam k141_233894 k141_233894_12 10882 11985 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
NULL(UNKNOWN) k141_233894 k141_233894_13 12302 12598 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_233894 k141_233894_14 12709 14175 + 3.A.1.15.3
Gene ID: k141_233894_4
Type: TC
Location: 1919 - 2950 (-)
Gene ID: k141_233894_5
Type: TC
Location: 2964 - 3539 (-)
Gene ID: k141_233894_6
Type: TC
Location: 3541 - 4167 (-)
Gene ID: k141_233894_7
Type: pfam
Location: 4167 - 5567 (-)
Gene ID: k141_233894_8
Type: TC
Location: 5560 - 6528 (-)
Gene ID: k141_233894_9
Type: TC
Location: 6543 - 7877 (-)
Gene ID: k141_233894_10
Type: CAZyme
Location: 8335 - 9345 (+)
Gene ID: k141_233894_11
Type: CAZyme
Location: 9435 - 10769 (+)
Gene ID: k141_233894_12
Type: pfam
Location: 10882 - 11985 (+)
Gene ID: k141_233894_13
Type:
Location: 12302 - 12598 (+)
Gene ID: k141_233894_14
Type: TC
Location: 12709 - 14175 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_233894_13 vegetarian > vegan 16.97864 0.01560

🧭 Explore Read Mapping of CGC

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