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Cluster: CGMR017821_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_133408 k141_133408_10 9253 10341 - GH179
pfam k141_133408 k141_133408_11 10535 11320 + Hydrolase | Hydrolase_like | Hydrolase_6
CAZyme k141_133408 k141_133408_12 11494 13662 + GH36
pfam k141_133408 k141_133408_13 13769 14530 - Lactamase_B_2
pfam k141_133408 k141_133408_14 14711 16078 + Transglut_core
CAZyme k141_133408 k141_133408_15 16184 18103 + GH127
STP k141_133408 k141_133408_16 18264 19778 - SBP_bac_1
TC k141_133408 k141_133408_17 19828 20745 - 3.A.1.1.29
TC k141_133408 k141_133408_18 20759 21691 - 3.A.1.1.10
CAZyme k141_133408 k141_133408_19 21928 22947 - GT2
CAZyme k141_133408 k141_133408_20 23227 24636 - GH29
Gene ID: k141_133408_10
Type: CAZyme
Location: 9253 - 10341 (-)
Gene ID: k141_133408_11
Type: pfam
Location: 10535 - 11320 (+)
Gene ID: k141_133408_12
Type: CAZyme
Location: 11494 - 13662 (+)
Gene ID: k141_133408_13
Type: pfam
Location: 13769 - 14530 (-)
Gene ID: k141_133408_14
Type: pfam
Location: 14711 - 16078 (+)
Gene ID: k141_133408_15
Type: CAZyme
Location: 16184 - 18103 (+)
Gene ID: k141_133408_16
Type: STP
Location: 18264 - 19778 (-)
Gene ID: k141_133408_17
Type: TC
Location: 19828 - 20745 (-)
Gene ID: k141_133408_18
Type: TC
Location: 20759 - 21691 (-)
Gene ID: k141_133408_19
Type: CAZyme
Location: 21928 - 22947 (-)
Gene ID: k141_133408_20
Type: CAZyme
Location: 23227 - 24636 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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