Cluster: CGMR017812_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR017812
- CGC Family ID: CGCFAM_00128
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_473010 | k141_473010_2 | 805 | 2673 | - | GH13_46 |
| CAZyme | k141_473010 | k141_473010_3 | 2680 | 3963 | - | GH13 |
| CAZyme | k141_473010 | k141_473010_4 | 4118 | 5512 | - | GH13 |
| CAZyme | k141_473010 | k141_473010_5 | 5535 | 7649 | - | GH13 |
| pfam | k141_473010 | k141_473010_6 | 7765 | 10524 | - | SusE | CBM26 | CBM26 | CBM26 |
| TC | k141_473010 | k141_473010_7 | 10562 | 12223 | - | 8.A.46.1.1 |
| TC | k141_473010 | k141_473010_8 | 12244 | 15288 | - | 1.B.14.6.1 |
| TC | k141_473010 | k141_473010_9 | 15443 | 17011 | - | 2.A.2.6.2 |
Gene ID: k141_473010_2
Type: CAZyme
Location: 805 - 2673 (-)
Type: CAZyme
Location: 805 - 2673 (-)
Gene ID: k141_473010_3
Type: CAZyme
Location: 2680 - 3963 (-)
Type: CAZyme
Location: 2680 - 3963 (-)
Gene ID: k141_473010_4
Type: CAZyme
Location: 4118 - 5512 (-)
Type: CAZyme
Location: 4118 - 5512 (-)
Gene ID: k141_473010_5
Type: CAZyme
Location: 5535 - 7649 (-)
Type: CAZyme
Location: 5535 - 7649 (-)
Gene ID: k141_473010_6
Type: pfam
Location: 7765 - 10524 (-)
Type: pfam
Location: 7765 - 10524 (-)
Gene ID: k141_473010_7
Type: TC
Location: 10562 - 12223 (-)
Type: TC
Location: 10562 - 12223 (-)
Gene ID: k141_473010_8
Type: TC
Location: 12244 - 15288 (-)
Type: TC
Location: 12244 - 15288 (-)
Gene ID: k141_473010_9
Type: TC
Location: 15443 - 17011 (-)
Type: TC
Location: 15443 - 17011 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.