Cluster: CGMR017812_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR017812
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_923370 | k141_923370_29 | 40979 | 42211 | - | GT30 |
| pfam | k141_923370 | k141_923370_30 | 42228 | 42584 | - | UPF0102 |
| peptidase | k141_923370 | k141_923370_31 | 42586 | 43299 | - | S51.001 |
| TC | k141_923370 | k141_923370_32 | 43486 | 43719 | + | 3.D.1.6.4 |
Gene ID: k141_923370_29
Type: CAZyme
Location: 40979 - 42211 (-)
Type: CAZyme
Location: 40979 - 42211 (-)
Gene ID: k141_923370_30
Type: pfam
Location: 42228 - 42584 (-)
Type: pfam
Location: 42228 - 42584 (-)
Gene ID: k141_923370_31
Type: peptidase
Location: 42586 - 43299 (-)
Type: peptidase
Location: 42586 - 43299 (-)
Gene ID: k141_923370_32
Type: TC
Location: 43486 - 43719 (+)
Type: TC
Location: 43486 - 43719 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_923370_32 | omnivore > vegan | 1.18398 | 0.02103 |