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Cluster: CGMR017204_CGC71

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_196481 k141_196481_8 7052 8464 - GH1
TC k141_196481 k141_196481_9 8471 10372 - 4.A.1.2.11
pfam k141_196481 k141_196481_10 10572 11429 - PRD | PRD | CAT_RBD
pfam k141_196481 k141_196481_11 11792 12529 - DUF4317
CAZyme k141_196481 k141_196481_12 12536 14029 - GH51_1
TF k141_196481 k141_196481_13 14659 15396 - HTH_AraC | HTH_AraC
CAZyme k141_196481 k141_196481_14 15403 16569 - GT4
CAZyme k141_196481 k141_196481_15 16585 17706 - GT4
Gene ID: k141_196481_8
Type: CAZyme
Location: 7052 - 8464 (-)
Gene ID: k141_196481_9
Type: TC
Location: 8471 - 10372 (-)
Gene ID: k141_196481_10
Type: pfam
Location: 10572 - 11429 (-)
Gene ID: k141_196481_11
Type: pfam
Location: 11792 - 12529 (-)
Gene ID: k141_196481_12
Type: CAZyme
Location: 12536 - 14029 (-)
Gene ID: k141_196481_13
Type: TF
Location: 14659 - 15396 (-)
Gene ID: k141_196481_14
Type: CAZyme
Location: 15403 - 16569 (-)
Gene ID: k141_196481_15
Type: CAZyme
Location: 16585 - 17706 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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