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Cluster: CGMR017204_CGC70

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_192006 k141_192006_2 335 1018 + 3.A.1.122.2
TF k141_192006 k141_192006_3 1328 1762 + LytTR
pfam k141_192006 k141_192006_4 1778 2221 + DUF3021
TC k141_192006 k141_192006_5 2372 3433 - 3.A.1.11.7
TC k141_192006 k141_192006_6 3473 4270 - 3.A.1.11.1
TC k141_192006 k141_192006_7 4267 5091 - 3.A.1.11.8
TC k141_192006 k141_192006_8 5084 6157 - 3.A.1.11.8
TF k141_192006 k141_192006_9 6198 6737 - HTH_3
pfam k141_192006 k141_192006_10 7406 8470 + Lactonase
CAZyme k141_192006 k141_192006_11 8631 10982 + GH3
Gene ID: k141_192006_2
Type: TC
Location: 335 - 1018 (+)
Gene ID: k141_192006_3
Type: TF
Location: 1328 - 1762 (+)
Gene ID: k141_192006_4
Type: pfam
Location: 1778 - 2221 (+)
Gene ID: k141_192006_5
Type: TC
Location: 2372 - 3433 (-)
Gene ID: k141_192006_6
Type: TC
Location: 3473 - 4270 (-)
Gene ID: k141_192006_7
Type: TC
Location: 4267 - 5091 (-)
Gene ID: k141_192006_8
Type: TC
Location: 5084 - 6157 (-)
Gene ID: k141_192006_9
Type: TF
Location: 6198 - 6737 (-)
Gene ID: k141_192006_10
Type: pfam
Location: 7406 - 8470 (+)
Gene ID: k141_192006_11
Type: CAZyme
Location: 8631 - 10982 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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