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Cluster: CGMR017204_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_147973 k141_147973_42 43700 45727 - GH31_4
TF k141_147973 k141_147973_43 46115 46939 + HTH_AraC | HTH_AraC
TC k141_147973 k141_147973_44 46934 48043 - 9.B.34.1.3
NULL(UNKNOWN) k141_147973 k141_147973_45 48258 48626 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_147973 k141_147973_46 49326 50345 + 3.A.1.1.26
TC k141_147973 k141_147973_47 50358 51323 + 3.A.1.1.11
TC k141_147973 k141_147973_48 51368 52189 + 3.A.1.1.23
TC k141_147973 k141_147973_49 52250 53623 + 3.A.1.1.34
sulfatase k141_147973 k141_147973_50 53616 54446 + S1_15
CAZyme k141_147973 k141_147973_51 54478 55287 + CE1
TF k141_147973 k141_147973_52 55321 56328 - LacI
STP k141_147973 k141_147973_53 56651 57886 + SBP_bac_1
TC k141_147973 k141_147973_54 57908 59287 + 3.A.1.1.27
TC k141_147973 k141_147973_55 59291 60163 + 3.A.1.1.27
CAZyme k141_147973 k141_147973_56 60233 62197 + GH13_14
CAZyme k141_147973 k141_147973_57 62217 64241 + GH133
CAZyme k141_147973 k141_147973_58 64299 66557 + GT35
CAZyme k141_147973 k141_147973_59 66611 68092 + GH77
CAZyme k141_147973 k141_147973_60 68094 69881 + CBM34 | GH13_20
Gene ID: k141_147973_42
Type: CAZyme
Location: 43700 - 45727 (-)
Gene ID: k141_147973_43
Type: TF
Location: 46115 - 46939 (+)
Gene ID: k141_147973_44
Type: TC
Location: 46934 - 48043 (-)
Gene ID: k141_147973_45
Type:
Location: 48258 - 48626 (-)
Gene ID: k141_147973_46
Type: TC
Location: 49326 - 50345 (+)
Gene ID: k141_147973_47
Type: TC
Location: 50358 - 51323 (+)
Gene ID: k141_147973_48
Type: TC
Location: 51368 - 52189 (+)
Gene ID: k141_147973_49
Type: TC
Location: 52250 - 53623 (+)
Gene ID: k141_147973_50
Type: sulfatase
Location: 53616 - 54446 (+)
Gene ID: k141_147973_51
Type: CAZyme
Location: 54478 - 55287 (+)
Gene ID: k141_147973_52
Type: TF
Location: 55321 - 56328 (-)
Gene ID: k141_147973_53
Type: STP
Location: 56651 - 57886 (+)
Gene ID: k141_147973_54
Type: TC
Location: 57908 - 59287 (+)
Gene ID: k141_147973_55
Type: TC
Location: 59291 - 60163 (+)
Gene ID: k141_147973_56
Type: CAZyme
Location: 60233 - 62197 (+)
Gene ID: k141_147973_57
Type: CAZyme
Location: 62217 - 64241 (+)
Gene ID: k141_147973_58
Type: CAZyme
Location: 64299 - 66557 (+)
Gene ID: k141_147973_59
Type: CAZyme
Location: 66611 - 68092 (+)
Gene ID: k141_147973_60
Type: CAZyme
Location: 68094 - 69881 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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