Cluster: CGMR017204_CGC38
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 10
- Substrate:
- Genome ID: CGMR017204
- CGC Family ID: CGCFAM_02575
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_106286 | k141_106286_5 | 4858 | 5748 | + | 3.A.1.1.29 |
| CAZyme | k141_106286 | k141_106286_6 | 5892 | 7382 | + | GH43_35 |
| sulfatase | k141_106286 | k141_106286_7 | 7503 | 8594 | + | S1_19 |
| TF | k141_106286 | k141_106286_8 | 9071 | 10141 | + | LacI |
| CAZyme | k141_106286 | k141_106286_9 | 10809 | 13298 | + | GH51_2 |
| TC | k141_106286 | k141_106286_10 | 13305 | 14225 | + | 3.A.1.1.10 |
| TC | k141_106286 | k141_106286_11 | 14241 | 15164 | + | 3.A.1.1.29 |
| STP | k141_106286 | k141_106286_12 | 15274 | 17097 | + | SBP_bac_1 |
| CAZyme | k141_106286 | k141_106286_13 | 17266 | 20301 | + | GH10 |
| CAZyme | k141_106286 | k141_106286_14 | 20411 | 22624 | - | GH182 |
| CAZyme | k141_106286 | k141_106286_15 | 22700 | 24163 | - | GH29 |
| TF | k141_106286 | k141_106286_16 | 24290 | 25105 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_106286 | k141_106286_17 | 25254 | 27494 | + | GH95 |
| CAZyme | k141_106286 | k141_106286_18 | 27570 | 29993 | + | GH2 |
| CAZyme | k141_106286 | k141_106286_19 | 30121 | 32004 | + | GH43_27 |
| peptidase | k141_106286 | k141_106286_20 | 32055 | 33578 | + | S09.UPW |
| CAZyme | k141_106286 | k141_106286_21 | 33611 | 35125 | + | GH39 |
| CAZyme | k141_106286 | k141_106286_22 | 35245 | 37617 | + | GH31_4 |
Gene ID: k141_106286_5
Type: TC
Location: 4858 - 5748 (+)
Type: TC
Location: 4858 - 5748 (+)
Gene ID: k141_106286_6
Type: CAZyme
Location: 5892 - 7382 (+)
Type: CAZyme
Location: 5892 - 7382 (+)
Gene ID: k141_106286_7
Type: sulfatase
Location: 7503 - 8594 (+)
Type: sulfatase
Location: 7503 - 8594 (+)
Gene ID: k141_106286_8
Type: TF
Location: 9071 - 10141 (+)
Type: TF
Location: 9071 - 10141 (+)
Gene ID: k141_106286_9
Type: CAZyme
Location: 10809 - 13298 (+)
Type: CAZyme
Location: 10809 - 13298 (+)
Gene ID: k141_106286_10
Type: TC
Location: 13305 - 14225 (+)
Type: TC
Location: 13305 - 14225 (+)
Gene ID: k141_106286_11
Type: TC
Location: 14241 - 15164 (+)
Type: TC
Location: 14241 - 15164 (+)
Gene ID: k141_106286_12
Type: STP
Location: 15274 - 17097 (+)
Type: STP
Location: 15274 - 17097 (+)
Gene ID: k141_106286_13
Type: CAZyme
Location: 17266 - 20301 (+)
Type: CAZyme
Location: 17266 - 20301 (+)
Gene ID: k141_106286_14
Type: CAZyme
Location: 20411 - 22624 (-)
Type: CAZyme
Location: 20411 - 22624 (-)
Gene ID: k141_106286_15
Type: CAZyme
Location: 22700 - 24163 (-)
Type: CAZyme
Location: 22700 - 24163 (-)
Gene ID: k141_106286_16
Type: TF
Location: 24290 - 25105 (+)
Type: TF
Location: 24290 - 25105 (+)
Gene ID: k141_106286_17
Type: CAZyme
Location: 25254 - 27494 (+)
Type: CAZyme
Location: 25254 - 27494 (+)
Gene ID: k141_106286_18
Type: CAZyme
Location: 27570 - 29993 (+)
Type: CAZyme
Location: 27570 - 29993 (+)
Gene ID: k141_106286_19
Type: CAZyme
Location: 30121 - 32004 (+)
Type: CAZyme
Location: 30121 - 32004 (+)
Gene ID: k141_106286_20
Type: peptidase
Location: 32055 - 33578 (+)
Type: peptidase
Location: 32055 - 33578 (+)
Gene ID: k141_106286_21
Type: CAZyme
Location: 33611 - 35125 (+)
Type: CAZyme
Location: 33611 - 35125 (+)
Gene ID: k141_106286_22
Type: CAZyme
Location: 35245 - 37617 (+)
Type: CAZyme
Location: 35245 - 37617 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eisenbergiella
Species
Eisenbergiella sp900555195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.