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Cluster: CGMR017204_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_109284 k141_109284_2 1192 3432 - GH36
CAZyme k141_109284 k141_109284_3 3553 6321 - GH3
CAZyme k141_109284 k141_109284_4 6406 7572 - GH5
TF k141_109284 k141_109284_5 8230 9102 - HTH_1
pfam k141_109284 k141_109284_6 9374 9946 + Chromate_transp
TC k141_109284 k141_109284_7 9943 10512 + 2.A.51.1.6
TC k141_109284 k141_109284_8 10554 11048 - 9.A.11.1.1
TC k141_109284 k141_109284_9 11038 11667 - 9.A.11.1.1
Gene ID: k141_109284_2
Type: CAZyme
Location: 1192 - 3432 (-)
Gene ID: k141_109284_3
Type: CAZyme
Location: 3553 - 6321 (-)
Gene ID: k141_109284_4
Type: CAZyme
Location: 6406 - 7572 (-)
Gene ID: k141_109284_5
Type: TF
Location: 8230 - 9102 (-)
Gene ID: k141_109284_6
Type: pfam
Location: 9374 - 9946 (+)
Gene ID: k141_109284_7
Type: TC
Location: 9943 - 10512 (+)
Gene ID: k141_109284_8
Type: TC
Location: 10554 - 11048 (-)
Gene ID: k141_109284_9
Type: TC
Location: 11038 - 11667 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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