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Cluster: CGMR017204_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_30974 k141_30974_19 20543 21973 + 3.B.1.1.2
pfam k141_30974 k141_30974_20 22008 22796 + OAD_gamma
pfam k141_30974 k141_30974_21 22830 23183 + Biotin_lipoyl | GCV_H
TC k141_30974 k141_30974_22 23263 24414 + 3.B.1.1.3
TC k141_30974 k141_30974_23 24473 25879 + 3.B.1.1.6
pfam k141_30974 k141_30974_24 26122 26550 + 4HBT | 4HBT_2
TF k141_30974 k141_30974_25 26619 27404 - HTH_AraC
CAZyme k141_30974 k141_30974_26 27634 29133 + GH51_1
Gene ID: k141_30974_19
Type: TC
Location: 20543 - 21973 (+)
Gene ID: k141_30974_20
Type: pfam
Location: 22008 - 22796 (+)
Gene ID: k141_30974_21
Type: pfam
Location: 22830 - 23183 (+)
Gene ID: k141_30974_22
Type: TC
Location: 23263 - 24414 (+)
Gene ID: k141_30974_23
Type: TC
Location: 24473 - 25879 (+)
Gene ID: k141_30974_24
Type: pfam
Location: 26122 - 26550 (+)
Gene ID: k141_30974_25
Type: TF
Location: 26619 - 27404 (-)
Gene ID: k141_30974_26
Type: CAZyme
Location: 27634 - 29133 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_30974_21 vegetarian > vegan 1.56945 0.01232

🧭 Explore Read Mapping of CGC

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