Cluster: CGMR016612_CGC7
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR016612
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_68042 | k141_68042_52 | 62005 | 63174 | - | GT4 |
| CAZyme | k141_68042 | k141_68042_53 | 63217 | 64428 | - | GT4 |
| CAZyme | k141_68042 | k141_68042_54 | 64526 | 65527 | - | GT2 |
| NULL(UNKNOWN) | k141_68042 | k141_68042_55 | 65524 | 66906 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_68042 | k141_68042_56 | 66903 | 68114 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_68042 | k141_68042_57 | 68185 | 70362 | - | 8.A.3.1.3 |
| pfam | k141_68042 | k141_68042_58 | 70390 | 71067 | - | Poly_export | SLBB | SLBB_2 |
| pfam | k141_68042 | k141_68042_59 | 71024 | 72379 | - | BBP2_2 |
| TC | k141_68042 | k141_68042_60 | 72363 | 73763 | - | 9.B.18.1.1 |
| pfam | k141_68042 | k141_68042_61 | 74321 | 75541 | - | DUF945 |
| peptidase | k141_68042 | k141_68042_62 | 75849 | 77336 | + | M32.UPW |
| TC | k141_68042 | k141_68042_63 | 77434 | 78360 | - | 9.B.34.1.3 |
| pfam | k141_68042 | k141_68042_64 | 78803 | 79282 | + | tRNA_edit |
| NULL(UNKNOWN) | k141_68042 | k141_68042_65 | 79287 | 79667 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_68042 | k141_68042_66 | 80682 | 81236 | + | GH23 |
| sulfatase | k141_68042 | k141_68042_67 | 81467 | 83131 | - | S1_23 |
| TC | k141_68042 | k141_68042_68 | 83390 | 84718 | - | 2.A.35.1.5 |
| TC | k141_68042 | k141_68042_69 | 84964 | 86847 | + | 1.B.52.2.2 |
| TC | k141_68042 | k141_68042_70 | 87147 | 89030 | + | 1.B.52.2.2 |
Gene ID: k141_68042_52
Type: CAZyme
Location: 62005 - 63174 (-)
Type: CAZyme
Location: 62005 - 63174 (-)
Gene ID: k141_68042_53
Type: CAZyme
Location: 63217 - 64428 (-)
Type: CAZyme
Location: 63217 - 64428 (-)
Gene ID: k141_68042_54
Type: CAZyme
Location: 64526 - 65527 (-)
Type: CAZyme
Location: 64526 - 65527 (-)
Gene ID: k141_68042_55
Type:
Location: 65524 - 66906 (-)
Type:
Location: 65524 - 66906 (-)
Gene ID: k141_68042_56
Type:
Location: 66903 - 68114 (-)
Type:
Location: 66903 - 68114 (-)
Gene ID: k141_68042_57
Type: TC
Location: 68185 - 70362 (-)
Type: TC
Location: 68185 - 70362 (-)
Gene ID: k141_68042_58
Type: pfam
Location: 70390 - 71067 (-)
Type: pfam
Location: 70390 - 71067 (-)
Gene ID: k141_68042_59
Type: pfam
Location: 71024 - 72379 (-)
Type: pfam
Location: 71024 - 72379 (-)
Gene ID: k141_68042_60
Type: TC
Location: 72363 - 73763 (-)
Type: TC
Location: 72363 - 73763 (-)
Gene ID: k141_68042_61
Type: pfam
Location: 74321 - 75541 (-)
Type: pfam
Location: 74321 - 75541 (-)
Gene ID: k141_68042_62
Type: peptidase
Location: 75849 - 77336 (+)
Type: peptidase
Location: 75849 - 77336 (+)
Gene ID: k141_68042_63
Type: TC
Location: 77434 - 78360 (-)
Type: TC
Location: 77434 - 78360 (-)
Gene ID: k141_68042_64
Type: pfam
Location: 78803 - 79282 (+)
Type: pfam
Location: 78803 - 79282 (+)
Gene ID: k141_68042_65
Type:
Location: 79287 - 79667 (+)
Type:
Location: 79287 - 79667 (+)
Gene ID: k141_68042_66
Type: CAZyme
Location: 80682 - 81236 (+)
Type: CAZyme
Location: 80682 - 81236 (+)
Gene ID: k141_68042_67
Type: sulfatase
Location: 81467 - 83131 (-)
Type: sulfatase
Location: 81467 - 83131 (-)
Gene ID: k141_68042_68
Type: TC
Location: 83390 - 84718 (-)
Type: TC
Location: 83390 - 84718 (-)
Gene ID: k141_68042_69
Type: TC
Location: 84964 - 86847 (+)
Type: TC
Location: 84964 - 86847 (+)
Gene ID: k141_68042_70
Type: TC
Location: 87147 - 89030 (+)
Type: TC
Location: 87147 - 89030 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Plesiomonas
Species
Plesiomonas shigelloides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.