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Cluster: CGMR016612_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_52449 k141_52449_21 23367 26012 + GH2
TC k141_52449 k141_52449_22 26434 28428 - 1.B.14.2.7
TC k141_52449 k141_52449_23 28991 29866 - 3.A.1.14.4
TC k141_52449 k141_52449_24 29872 30921 - 3.A.1.14.4
TC k141_52449 k141_52449_25 30945 32039 - 3.A.1.14.4
TC k141_52449 k141_52449_26 32046 33101 - 3.A.1.14.8
pfam k141_52449 k141_52449_27 33435 37349 + DEAD | Helicase_C | HA2_N | OB_NTP_bind | DUF3418 | HA2_C
pfam k141_52449 k141_52449_28 37525 38574 - DUF2860
CAZyme k141_52449 k141_52449_29 39037 39942 + GH73
pfam k141_52449 k141_52449_30 40164 41105 + Ter
TC k141_52449 k141_52449_31 41143 42276 + 1.A.23.4.3
pfam k141_52449 k141_52449_32 42450 43181 - adh_short | adh_short_C2
NULL(UNKNOWN) k141_52449 k141_52449_33 43320 43718 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_52449 k141_52449_34 43841 45241 - 2.A.3.2.8
NULL(UNKNOWN) k141_52449 k141_52449_35 45933 46637 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_52449 k141_52449_36 46799 47176 - Lipoprotein_15 | Lipoprotein_15
CAZyme k141_52449 k141_52449_37 47708 48478 - GH23
TF k141_52449 k141_52449_38 48575 49000 - 0042628
TC k141_52449 k141_52449_39 49327 50856 + 3.A.1.5.20
TC k141_52449 k141_52449_40 50856 51944 + 3.A.1.5.11
TC k141_52449 k141_52449_41 51941 52750 + 3.A.1.5.20
TC k141_52449 k141_52449_42 52750 53589 + 3.A.1.5.10
TC k141_52449 k141_52449_43 53576 54166 + 3.A.1.5.3
Gene ID: k141_52449_21
Type: CAZyme
Location: 23367 - 26012 (+)
Gene ID: k141_52449_22
Type: TC
Location: 26434 - 28428 (-)
Gene ID: k141_52449_23
Type: TC
Location: 28991 - 29866 (-)
Gene ID: k141_52449_24
Type: TC
Location: 29872 - 30921 (-)
Gene ID: k141_52449_25
Type: TC
Location: 30945 - 32039 (-)
Gene ID: k141_52449_26
Type: TC
Location: 32046 - 33101 (-)
Gene ID: k141_52449_27
Type: pfam
Location: 33435 - 37349 (+)
Gene ID: k141_52449_28
Type: pfam
Location: 37525 - 38574 (-)
Gene ID: k141_52449_29
Type: CAZyme
Location: 39037 - 39942 (+)
Gene ID: k141_52449_30
Type: pfam
Location: 40164 - 41105 (+)
Gene ID: k141_52449_31
Type: TC
Location: 41143 - 42276 (+)
Gene ID: k141_52449_32
Type: pfam
Location: 42450 - 43181 (-)
Gene ID: k141_52449_33
Type:
Location: 43320 - 43718 (+)
Gene ID: k141_52449_34
Type: TC
Location: 43841 - 45241 (-)
Gene ID: k141_52449_35
Type:
Location: 45933 - 46637 (-)
Gene ID: k141_52449_36
Type: pfam
Location: 46799 - 47176 (-)
Gene ID: k141_52449_37
Type: CAZyme
Location: 47708 - 48478 (-)
Gene ID: k141_52449_38
Type: TF
Location: 48575 - 49000 (-)
Gene ID: k141_52449_39
Type: TC
Location: 49327 - 50856 (+)
Gene ID: k141_52449_40
Type: TC
Location: 50856 - 51944 (+)
Gene ID: k141_52449_41
Type: TC
Location: 51941 - 52750 (+)
Gene ID: k141_52449_42
Type: TC
Location: 52750 - 53589 (+)
Gene ID: k141_52449_43
Type: TC
Location: 53576 - 54166 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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