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Cluster: CGMR016612_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_99104 k141_99104_11 14360 16327 - 9.B.14.1.3
pfam k141_99104 k141_99104_12 16324 16830 - CcmE
TC k141_99104 k141_99104_13 16827 17069 - 3.A.1.107.3
TC k141_99104 k141_99104_14 17066 17839 - 9.B.14.2.3
TC k141_99104 k141_99104_15 18177 18836 - 3.A.1.107.3
TC k141_99104 k141_99104_16 18843 19460 - 3.A.1.107.3
pfam k141_99104 k141_99104_17 19885 20745 - Exo_endo_phos
TC k141_99104 k141_99104_18 20873 22495 - 4.A.1.1.17
CAZyme k141_99104 k141_99104_19 22542 24335 - GH13_31
TF k141_99104 k141_99104_20 24422 25387 - LacI
TC k141_99104 k141_99104_21 25736 26965 + 2.A.55.3.2
NULL(UNKNOWN) k141_99104 k141_99104_22 27078 27365 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_99104 k141_99104_23 27552 29285 + 2.A.53.3.9
pfam k141_99104 k141_99104_24 29470 30516 - NadA
TC k141_99104 k141_99104_25 30637 32298 - 2.A.81.1.5
TC k141_99104 k141_99104_26 32743 33663 - 1.A.30.1.5
TC k141_99104 k141_99104_27 33754 34494 - 1.A.30.1.5
pfam k141_99104 k141_99104_28 34792 36216 + RNase_T | Exonuc_X-T_C
TC k141_99104 k141_99104_29 36385 37299 + 2.A.7.7.2
Gene ID: k141_99104_11
Type: TC
Location: 14360 - 16327 (-)
Gene ID: k141_99104_12
Type: pfam
Location: 16324 - 16830 (-)
Gene ID: k141_99104_13
Type: TC
Location: 16827 - 17069 (-)
Gene ID: k141_99104_14
Type: TC
Location: 17066 - 17839 (-)
Gene ID: k141_99104_15
Type: TC
Location: 18177 - 18836 (-)
Gene ID: k141_99104_16
Type: TC
Location: 18843 - 19460 (-)
Gene ID: k141_99104_17
Type: pfam
Location: 19885 - 20745 (-)
Gene ID: k141_99104_18
Type: TC
Location: 20873 - 22495 (-)
Gene ID: k141_99104_19
Type: CAZyme
Location: 22542 - 24335 (-)
Gene ID: k141_99104_20
Type: TF
Location: 24422 - 25387 (-)
Gene ID: k141_99104_21
Type: TC
Location: 25736 - 26965 (+)
Gene ID: k141_99104_22
Type:
Location: 27078 - 27365 (-)
Gene ID: k141_99104_23
Type: TC
Location: 27552 - 29285 (+)
Gene ID: k141_99104_24
Type: pfam
Location: 29470 - 30516 (-)
Gene ID: k141_99104_25
Type: TC
Location: 30637 - 32298 (-)
Gene ID: k141_99104_26
Type: TC
Location: 32743 - 33663 (-)
Gene ID: k141_99104_27
Type: TC
Location: 33754 - 34494 (-)
Gene ID: k141_99104_28
Type: pfam
Location: 34792 - 36216 (+)
Gene ID: k141_99104_29
Type: TC
Location: 36385 - 37299 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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