Cluster: CGMR016612_CGC14
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR016612
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_158685 | k141_158685_30 | 36738 | 37907 | - | 2.A.33.1.2 |
| TC | k141_158685 | k141_158685_31 | 38215 | 39366 | + | 2.A.58.1.2 |
| sulfatase | k141_158685 | k141_158685_32 | 39660 | 40454 | - | S1_63 |
| pfam | k141_158685 | k141_158685_33 | 40456 | 41265 | - | LGT |
| TC | k141_158685 | k141_158685_34 | 41273 | 42061 | - | 2.A.102.4.3 |
| TC | k141_158685 | k141_158685_35 | 42164 | 44428 | - | 8.A.7.1.3 |
| STP | k141_158685 | k141_158685_36 | 44436 | 44966 | - | NUDIX |
| pfam | k141_158685 | k141_158685_37 | 45742 | 46437 | + | MutH |
| TC | k141_158685 | k141_158685_38 | 46572 | 47315 | + | 2.A.109.2.3 |
| TC | k141_158685 | k141_158685_39 | 47403 | 48437 | + | 8.A.5.1.5 |
| pfam | k141_158685 | k141_158685_40 | 49043 | 49516 | + | Ferritin |
| TC | k141_158685 | k141_158685_41 | 49646 | 50905 | - | 2.A.23.1.2 |
| CAZyme | k141_158685 | k141_158685_42 | 51380 | 53599 | + | GT2 |
Gene ID: k141_158685_30
Type: TC
Location: 36738 - 37907 (-)
Type: TC
Location: 36738 - 37907 (-)
Gene ID: k141_158685_31
Type: TC
Location: 38215 - 39366 (+)
Type: TC
Location: 38215 - 39366 (+)
Gene ID: k141_158685_32
Type: sulfatase
Location: 39660 - 40454 (-)
Type: sulfatase
Location: 39660 - 40454 (-)
Gene ID: k141_158685_33
Type: pfam
Location: 40456 - 41265 (-)
Type: pfam
Location: 40456 - 41265 (-)
Gene ID: k141_158685_34
Type: TC
Location: 41273 - 42061 (-)
Type: TC
Location: 41273 - 42061 (-)
Gene ID: k141_158685_35
Type: TC
Location: 42164 - 44428 (-)
Type: TC
Location: 42164 - 44428 (-)
Gene ID: k141_158685_36
Type: STP
Location: 44436 - 44966 (-)
Type: STP
Location: 44436 - 44966 (-)
Gene ID: k141_158685_37
Type: pfam
Location: 45742 - 46437 (+)
Type: pfam
Location: 45742 - 46437 (+)
Gene ID: k141_158685_38
Type: TC
Location: 46572 - 47315 (+)
Type: TC
Location: 46572 - 47315 (+)
Gene ID: k141_158685_39
Type: TC
Location: 47403 - 48437 (+)
Type: TC
Location: 47403 - 48437 (+)
Gene ID: k141_158685_40
Type: pfam
Location: 49043 - 49516 (+)
Type: pfam
Location: 49043 - 49516 (+)
Gene ID: k141_158685_41
Type: TC
Location: 49646 - 50905 (-)
Type: TC
Location: 49646 - 50905 (-)
Gene ID: k141_158685_42
Type: CAZyme
Location: 51380 - 53599 (+)
Type: CAZyme
Location: 51380 - 53599 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Plesiomonas
Species
Plesiomonas shigelloides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.