Cluster: CGMR015636_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR015636
- CGC Family ID: CGCFAM_00156
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_167862 | k141_167862_36 | 41775 | 43454 | + | 3.A.1.120.6 |
| NULL(UNKNOWN) | k141_167862 | k141_167862_37 | 43595 | 44869 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_167862 | k141_167862_38 | 44891 | 45901 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_167862 | k141_167862_39 | 46042 | 47169 | - | GT2 |
| CAZyme | k141_167862 | k141_167862_40 | 47179 | 48315 | - | GT2 |
Gene ID: k141_167862_36
Type: TC
Location: 41775 - 43454 (+)
Type: TC
Location: 41775 - 43454 (+)
Gene ID: k141_167862_37
Type:
Location: 43595 - 44869 (-)
Type:
Location: 43595 - 44869 (-)
Gene ID: k141_167862_38
Type:
Location: 44891 - 45901 (-)
Type:
Location: 44891 - 45901 (-)
Gene ID: k141_167862_39
Type: CAZyme
Location: 46042 - 47169 (-)
Type: CAZyme
Location: 46042 - 47169 (-)
Gene ID: k141_167862_40
Type: CAZyme
Location: 47179 - 48315 (-)
Type: CAZyme
Location: 47179 - 48315 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.