Cluster: CGMR015636_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR015636
- CGC Family ID: CGCFAM_08296
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_95834 | k141_95834_69 | 82235 | 83005 | + | 1.A.23.4.2 |
| peptidase | k141_95834 | k141_95834_70 | 83027 | 83893 | - | S09.UPW |
| CAZyme | k141_95834 | k141_95834_71 | 83902 | 84738 | - | CE1 |
| NULL(UNKNOWN) | k141_95834 | k141_95834_72 | 84979 | 86040 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_95834 | k141_95834_73 | 86037 | 86387 | - | PadR |
| TC | k141_95834 | k141_95834_74 | 86543 | 87253 | - | 1.C.82.1.1 |
Gene ID: k141_95834_69
Type: TC
Location: 82235 - 83005 (+)
Type: TC
Location: 82235 - 83005 (+)
Gene ID: k141_95834_70
Type: peptidase
Location: 83027 - 83893 (-)
Type: peptidase
Location: 83027 - 83893 (-)
Gene ID: k141_95834_71
Type: CAZyme
Location: 83902 - 84738 (-)
Type: CAZyme
Location: 83902 - 84738 (-)
Gene ID: k141_95834_72
Type:
Location: 84979 - 86040 (-)
Type:
Location: 84979 - 86040 (-)
Gene ID: k141_95834_73
Type: TF
Location: 86037 - 86387 (-)
Type: TF
Location: 86037 - 86387 (-)
Gene ID: k141_95834_74
Type: TC
Location: 86543 - 87253 (-)
Type: TC
Location: 86543 - 87253 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.