dbCAN Logo

Cluster: CGMR015636_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_62799 k141_62799_24 36426 37106 + 3.A.1.125.3
pfam k141_62799 k141_62799_25 37108 40260 + FtsX | FtsX
pfam k141_62799 k141_62799_26 40285 41610 + HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC k141_62799 k141_62799_27 41610 42395 + 3.A.1.122.2
TC k141_62799 k141_62799_28 42392 43627 + 3.A.1.122.2
TC k141_62799 k141_62799_29 44160 45794 - 3.A.1.5.11
TC k141_62799 k141_62799_30 45791 46675 - 3.A.1.5.2
TC k141_62799 k141_62799_31 46662 47723 - 3.A.1.5.20
TC k141_62799 k141_62799_32 47725 49476 - 3.A.1.5.3
STP k141_62799 k141_62799_33 49516 51027 - HD
STP k141_62799 k141_62799_34 51100 52032 - PfkB
TC k141_62799 k141_62799_35 52132 53835 - 8.A.7.1.1
STP k141_62799 k141_62799_36 53970 54233 - PTS-HPr
pfam k141_62799 k141_62799_37 54599 56575 - DUF4012
CAZyme k141_62799 k141_62799_38 56772 57770 + GT2
pfam k141_62799 k141_62799_39 57767 60334 + YfhO | YfhO
CAZyme k141_62799 k141_62799_40 60403 61521 - GT2
pfam k141_62799 k141_62799_41 61686 62795 - LicD
CAZyme k141_62799 k141_62799_42 62816 65557 - GT2 | GT2
Gene ID: k141_62799_24
Type: TC
Location: 36426 - 37106 (+)
Gene ID: k141_62799_25
Type: pfam
Location: 37108 - 40260 (+)
Gene ID: k141_62799_26
Type: pfam
Location: 40285 - 41610 (+)
Gene ID: k141_62799_27
Type: TC
Location: 41610 - 42395 (+)
Gene ID: k141_62799_28
Type: TC
Location: 42392 - 43627 (+)
Gene ID: k141_62799_29
Type: TC
Location: 44160 - 45794 (-)
Gene ID: k141_62799_30
Type: TC
Location: 45791 - 46675 (-)
Gene ID: k141_62799_31
Type: TC
Location: 46662 - 47723 (-)
Gene ID: k141_62799_32
Type: TC
Location: 47725 - 49476 (-)
Gene ID: k141_62799_33
Type: STP
Location: 49516 - 51027 (-)
Gene ID: k141_62799_34
Type: STP
Location: 51100 - 52032 (-)
Gene ID: k141_62799_35
Type: TC
Location: 52132 - 53835 (-)
Gene ID: k141_62799_36
Type: STP
Location: 53970 - 54233 (-)
Gene ID: k141_62799_37
Type: pfam
Location: 54599 - 56575 (-)
Gene ID: k141_62799_38
Type: CAZyme
Location: 56772 - 57770 (+)
Gene ID: k141_62799_39
Type: pfam
Location: 57767 - 60334 (+)
Gene ID: k141_62799_40
Type: CAZyme
Location: 60403 - 61521 (-)
Gene ID: k141_62799_41
Type: pfam
Location: 61686 - 62795 (-)
Gene ID: k141_62799_42
Type: CAZyme
Location: 62816 - 65557 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List