Cluster: CGMR015071_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR015071
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_272227 | k141_272227_20 | 21331 | 22134 | - | 3.A.15.1.1 |
| pfam | k141_272227 | k141_272227_21 | 22134 | 22973 | - | Shikimate_DH | Shikimate_dh_N | SDH_C |
| pfam | k141_272227 | k141_272227_22 | 22978 | 26901 | - | Helicase_C | HA2_N | OB_NTP_bind | DUF3418 | HA2_C |
| TC | k141_272227 | k141_272227_23 | 26892 | 28898 | - | 3.A.1.27.3 |
| pfam | k141_272227 | k141_272227_24 | 29067 | 29333 | - | Ribosomal_S15 |
| pfam | k141_272227 | k141_272227_25 | 29598 | 30590 | + | NAD_Gly3P_dh_N | NAD_Gly3P_dh_C | GPD_NAD_C_bact |
| CAZyme | k141_272227 | k141_272227_26 | 30630 | 33389 | + | GH20 |
Gene ID: k141_272227_20
Type: TC
Location: 21331 - 22134 (-)
Type: TC
Location: 21331 - 22134 (-)
Gene ID: k141_272227_21
Type: pfam
Location: 22134 - 22973 (-)
Type: pfam
Location: 22134 - 22973 (-)
Gene ID: k141_272227_22
Type: pfam
Location: 22978 - 26901 (-)
Type: pfam
Location: 22978 - 26901 (-)
Gene ID: k141_272227_23
Type: TC
Location: 26892 - 28898 (-)
Type: TC
Location: 26892 - 28898 (-)
Gene ID: k141_272227_24
Type: pfam
Location: 29067 - 29333 (-)
Type: pfam
Location: 29067 - 29333 (-)
Gene ID: k141_272227_25
Type: pfam
Location: 29598 - 30590 (+)
Type: pfam
Location: 29598 - 30590 (+)
Gene ID: k141_272227_26
Type: CAZyme
Location: 30630 - 33389 (+)
Type: CAZyme
Location: 30630 - 33389 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
Victivallaceae
Genus
CALXXL01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.