Cluster: CGMR015011_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR015011
- CGC Family ID: CGCFAM_05417
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_71930 | k141_71930_22 | 19807 | 20721 | + | 8.A.21.2.2 |
| NULL(UNKNOWN) | k141_71930 | k141_71930_23 | 20721 | 21176 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_71930 | k141_71930_24 | 21430 | 21981 | + | Tubulin |
| CAZyme | k141_71930 | k141_71930_25 | 22037 | 22831 | - | GH23 |
Gene ID: k141_71930_22
Type: TC
Location: 19807 - 20721 (+)
Type: TC
Location: 19807 - 20721 (+)
Gene ID: k141_71930_23
Type:
Location: 20721 - 21176 (+)
Type:
Location: 20721 - 21176 (+)
Gene ID: k141_71930_24
Type: pfam
Location: 21430 - 21981 (+)
Type: pfam
Location: 21430 - 21981 (+)
Gene ID: k141_71930_25
Type: CAZyme
Location: 22037 - 22831 (-)
Type: CAZyme
Location: 22037 - 22831 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Thiopseudomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.