Cluster: CGMR015011_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR015011
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_254902 | k141_254902_6 | 4026 | 5159 | + | GT19 |
| pfam | k141_254902 | k141_254902_7 | 5271 | 5876 | + | RNase_HII |
| pfam | k141_254902 | k141_254902_8 | 5873 | 7303 | + | PLDc_2 | PLDc_2 | PLDc_N |
| TC | k141_254902 | k141_254902_9 | 7354 | 8652 | - | 2.A.56.1.2 |
| pfam | k141_254902 | k141_254902_10 | 8642 | 9133 | - | DctQ |
| TC | k141_254902 | k141_254902_11 | 9216 | 10220 | - | 2.A.56.1.2 |
Gene ID: k141_254902_6
Type: CAZyme
Location: 4026 - 5159 (+)
Type: CAZyme
Location: 4026 - 5159 (+)
Gene ID: k141_254902_7
Type: pfam
Location: 5271 - 5876 (+)
Type: pfam
Location: 5271 - 5876 (+)
Gene ID: k141_254902_8
Type: pfam
Location: 5873 - 7303 (+)
Type: pfam
Location: 5873 - 7303 (+)
Gene ID: k141_254902_9
Type: TC
Location: 7354 - 8652 (-)
Type: TC
Location: 7354 - 8652 (-)
Gene ID: k141_254902_10
Type: pfam
Location: 8642 - 9133 (-)
Type: pfam
Location: 8642 - 9133 (-)
Gene ID: k141_254902_11
Type: TC
Location: 9216 - 10220 (-)
Type: TC
Location: 9216 - 10220 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Thiopseudomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.