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Cluster: CGMR014758_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_113538 k141_113538_9 6340 7038 - 3.A.1.4.10
TC k141_113538 k141_113538_10 7031 7876 - 3.A.1.4.10
TC k141_113538 k141_113538_11 7873 8985 - 3.A.1.4.8
TC k141_113538 k141_113538_12 8996 9910 - 3.A.1.4.10
pfam k141_113538 k141_113538_13 9983 11155 - ANF_receptor | Peripla_BP_5 | Peripla_BP_6
TC k141_113538 k141_113538_14 11573 12814 + 2.A.37.3.3
STP k141_113538 k141_113538_15 12811 13431 + TetR_N
TF k141_113538 k141_113538_16 13443 14858 - HTH_AraC | HTH_AraC
CAZyme k141_113538 k141_113538_17 14902 17223 - GH3
TC k141_113538 k141_113538_18 17225 18058 - 3.A.1.1.20
TC k141_113538 k141_113538_19 18069 18965 - 3.A.1.1.36
STP k141_113538 k141_113538_20 19012 20316 - SBP_bac_1
TC k141_113538 k141_113538_21 20452 22263 - 8.A.59.2.1
Gene ID: k141_113538_9
Type: TC
Location: 6340 - 7038 (-)
Gene ID: k141_113538_10
Type: TC
Location: 7031 - 7876 (-)
Gene ID: k141_113538_11
Type: TC
Location: 7873 - 8985 (-)
Gene ID: k141_113538_12
Type: TC
Location: 8996 - 9910 (-)
Gene ID: k141_113538_13
Type: pfam
Location: 9983 - 11155 (-)
Gene ID: k141_113538_14
Type: TC
Location: 11573 - 12814 (+)
Gene ID: k141_113538_15
Type: STP
Location: 12811 - 13431 (+)
Gene ID: k141_113538_16
Type: TF
Location: 13443 - 14858 (-)
Gene ID: k141_113538_17
Type: CAZyme
Location: 14902 - 17223 (-)
Gene ID: k141_113538_18
Type: TC
Location: 17225 - 18058 (-)
Gene ID: k141_113538_19
Type: TC
Location: 18069 - 18965 (-)
Gene ID: k141_113538_20
Type: STP
Location: 19012 - 20316 (-)
Gene ID: k141_113538_21
Type: TC
Location: 20452 - 22263 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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