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Cluster: CGMR014146_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_302733 k141_302733_1 301 1233 - 3.A.1.2.3
STP k141_302733 k141_302733_2 1357 2334 - Peripla_BP_1
TC k141_302733 k141_302733_3 2321 4153 - 8.A.59.2.1
TF k141_302733 k141_302733_4 4150 5760 - HTH_AraC | HTH_AraC
TC k141_302733 k141_302733_5 5896 7548 - 3.A.1.2.3
TC k141_302733 k141_302733_6 7569 9077 - 3.A.1.2.3
pfam k141_302733 k141_302733_7 9158 10411 - Peripla_BP_4 | Peripla_BP_7
STP k141_302733 k141_302733_8 11028 12740 - MCPsignal
CAZyme k141_302733 k141_302733_9 13013 14731 - CBM34 | GH13_20
Gene ID: k141_302733_1
Type: TC
Location: 301 - 1233 (-)
Gene ID: k141_302733_2
Type: STP
Location: 1357 - 2334 (-)
Gene ID: k141_302733_3
Type: TC
Location: 2321 - 4153 (-)
Gene ID: k141_302733_4
Type: TF
Location: 4150 - 5760 (-)
Gene ID: k141_302733_5
Type: TC
Location: 5896 - 7548 (-)
Gene ID: k141_302733_6
Type: TC
Location: 7569 - 9077 (-)
Gene ID: k141_302733_7
Type: pfam
Location: 9158 - 10411 (-)
Gene ID: k141_302733_8
Type: STP
Location: 11028 - 12740 (-)
Gene ID: k141_302733_9
Type: CAZyme
Location: 13013 - 14731 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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