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Cluster: CGMR014146_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_57075 k141_57075_40 39417 40538 - CE12
NULL(UNKNOWN) k141_57075 k141_57075_41 40540 41076 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_57075 k141_57075_42 41428 41946 + CarD_TRCF_RID
TC k141_57075 k141_57075_43 42061 44154 - 1.B.52.2.1
pfam k141_57075 k141_57075_44 44512 45300 - DUF7402
pfam k141_57075 k141_57075_45 45282 45917 - DUF624
CAZyme k141_57075 k141_57075_46 45947 47146 - GH88
TC k141_57075 k141_57075_47 47267 48115 - 3.A.1.1.11
TC k141_57075 k141_57075_48 48135 49187 - 3.A.1.1.23
STP k141_57075 k141_57075_49 49275 50666 - SBP_bac_1
TC k141_57075 k141_57075_50 50981 52768 + 8.A.59.2.1
TF k141_57075 k141_57075_51 52801 54417 + HTH_AraC | HTH_AraC
CAZyme k141_57075 k141_57075_52 54484 56322 + PL33_1
Gene ID: k141_57075_40
Type: CAZyme
Location: 39417 - 40538 (-)
Gene ID: k141_57075_41
Type:
Location: 40540 - 41076 (-)
Gene ID: k141_57075_42
Type: pfam
Location: 41428 - 41946 (+)
Gene ID: k141_57075_43
Type: TC
Location: 42061 - 44154 (-)
Gene ID: k141_57075_44
Type: pfam
Location: 44512 - 45300 (-)
Gene ID: k141_57075_45
Type: pfam
Location: 45282 - 45917 (-)
Gene ID: k141_57075_46
Type: CAZyme
Location: 45947 - 47146 (-)
Gene ID: k141_57075_47
Type: TC
Location: 47267 - 48115 (-)
Gene ID: k141_57075_48
Type: TC
Location: 48135 - 49187 (-)
Gene ID: k141_57075_49
Type: STP
Location: 49275 - 50666 (-)
Gene ID: k141_57075_50
Type: TC
Location: 50981 - 52768 (+)
Gene ID: k141_57075_51
Type: TF
Location: 52801 - 54417 (+)
Gene ID: k141_57075_52
Type: CAZyme
Location: 54484 - 56322 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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