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Cluster: CGMR014146_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_322309 k141_322309_22 17262 18614 - 3.A.24.3.1
pfam k141_322309 k141_322309_23 18669 19097 - HIT
CAZyme k141_322309 k141_322309_24 19333 21480 - GH112
CAZyme k141_322309 k141_322309_25 21571 22623 - GH105
STP k141_322309 k141_322309_26 22790 24550 - SBP_bac_1
TC k141_322309 k141_322309_27 24654 25580 - 3.A.1.1.29
TC k141_322309 k141_322309_28 25595 26554 - 3.A.1.1.29
TF k141_322309 k141_322309_29 26978 27901 + HTH_AraC | HTH_AraC
CAZyme k141_322309 k141_322309_30 27950 29908 + CE12
Gene ID: k141_322309_22
Type: TC
Location: 17262 - 18614 (-)
Gene ID: k141_322309_23
Type: pfam
Location: 18669 - 19097 (-)
Gene ID: k141_322309_24
Type: CAZyme
Location: 19333 - 21480 (-)
Gene ID: k141_322309_25
Type: CAZyme
Location: 21571 - 22623 (-)
Gene ID: k141_322309_26
Type: STP
Location: 22790 - 24550 (-)
Gene ID: k141_322309_27
Type: TC
Location: 24654 - 25580 (-)
Gene ID: k141_322309_28
Type: TC
Location: 25595 - 26554 (-)
Gene ID: k141_322309_29
Type: TF
Location: 26978 - 27901 (+)
Gene ID: k141_322309_30
Type: CAZyme
Location: 27950 - 29908 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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